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. 2009 May 5;10:129. doi: 10.1186/1471-2105-10-129

Table 6.

Example sentences used in testing of the SVM model

Test sentence SVM score
These homologous proteins, designated the "enolase superfamily", include enolase as well as more metabolically specialized enzymes: mandelate racemase, galactonate dehydratase, glucarate dehydratase, muconate-lactonizing enzymes, N-acylamino acid racemase, beta-methylaspartate ammonia-lyase, and o-succinylbenzoate synthase. 3.99

GlucD is a member of the mandelate racemase (MR) subgroup of the enolase superfamily, the members of which catalyze reactions that are initiated by abstraction of the alpha-proton of a carboxylate anion substrate. 3.42

The structure of Neurospora crassa 3-carboxy-cis, cis-muconate lactonizing enzyme, a beta propeller cycloisomerase. 1.41

The corresponding cDNA was amplified from a library of lobster muscle cDNA, and a sequence corresponding to residues 27–398 was determined. -1.10

The values for kcat were reduced 4.5 × 10(3)-fold for (R)-®delate and 2.9 × 10(4)-fold for (S)-mandelate; the values for kcat/Km were reduced 3 × 10(4)-fold. -3.31

Sample positive and negative test examples classified and scored by the SVM model.