Skip to main content
. Author manuscript; available in PMC: 2010 Jan 12.
Published in final edited form as: Chemphyschem. 2009 Jan 12;10(1):55–65. doi: 10.1002/cphc.200800581

Table 3.

Photophysical properties of the photoactivatable DCDHF in Scheme 1 and other photoswitchable fluorophores.[a]

λabs [nm] λfl [nm] εmax [m−1 cm−1] ΦF ΦP[b] ΦB in gelatin Ntot,e in gelatin
1a 424 552 29100 n/a good (0.0059) n/a n/a
1b 570 613 54100 0.025−0.39 n/a 4.1 × 10−6 2.3 × 106
Dronpa[c] 503 518 95000 0.85 very good ∼ 3.2 × 10−5
PA-GFP[d] 504 517 17400 0.79 moderate ∼ 6.9 × 10−5 ∼ 140,000
EYFP[e] 514 527 84000 0.61 moderate 5.5 × 10−5 ∼ 140,000
Cy3/Cy5[f] 647 662 200000 0.18 very good ∼ 670,000
PC-RhB[g] 552 580 110000 0.65 moderate ∼ 600,000
[a]

Values for 1a and 1b reported in ethanol unless otherwise stated. In the other systems, we calculated estimations from available information (see discussion in the supporting material of reference [23]).

[b]

Quantum yield of photoconversion; for the DCDHF system, from azide with 407 nm illumination. Quantitative values for other systems have not been reported, so we include qualitative comparisons.

[c]

Aqueous photophysical values for the reversibly photoswitchable GFP called Dronpa from refs. [57] and [67].

[d]

Aqueous and in-cell photophysical values for the irreversibly photoswitchable GFP called PA-GFP as reported in refs. [25,56], and [68].

[e]

Photophysical values, as reported in refs. [25,55,68], and [69].

[f]

Aqueous photophysical values of a Cy3/Cy5 dimer on hybridized DNA, as reported in refs. [58] and [68].

[g]

Photophysical values of a photoswitchable rhodamine B embedded in a poly(vinyl alcohol) film, as reported in ref. [59]; the range of Ntot,e values is for rhodamine 6G in water from ref. [70] and tetramethyl rhodamine in lipid membranes from ref. [68].