Table 2. Microbial genomic mutation rates calculated using the CT method.
Organism | Mutation reportera | μg(I) (−HS)b | μg(B) (CTs)c | μg (−HS)b |
Phage M13 | lacZα | 0.00103 | 0.0038 (245) | 0.0048 |
Phage λ | cII | 0.00041 | 0.0022 (8) | 0.0026 |
Phage T4 | rI | 0.00079 | 0.0030 (6) | 0.0038 |
Herpes simplex virus | tk | 0.00083 | 0.0035 (5) | 0.0043 |
Escherichia coli | lacI | 0.00230 (0.00042) | 0.0025 (24) | 0.0048 (0.0030) |
Saccharomyces cerevisiae | URA3 (4) | 0.00016 | 0.0029 (108) | 0.0030 |
CAN1 (3) | 0.00056 | 0.0058 (76) | 0.0063 | |
Schizosaccharomyces pombe | ura4 | 0.00031 | 0.0019 (5) | 0.0022 |
ura5 | 0.00050 | 0.0034 (4) | 0.0039 | |
Mesophile mean | 0.00077 (0.00056) | 0.0032 | 0.0040 (0.0038) | |
Mesophile range | 15-fold (6.7-fold) | 3.0-fold | 2.9-fold (2.9-fold) | |
Sulfolobus acidocaldarius | pyrEF | 0.00053 (0.00026) | 0.00011 (1) | 0.00065 (0.00037) |
Thermus thermophilus | pyrEF | 0.00038 0.00013 | 0.00054 (2) | 0.00093 (0.00067) |
Thermophile mean | 0.00046 (0.00019) | 0.00033 | 0.00079 (0.00052) | |
Thermophile range | 1.4-fold (2.0-fold) | 4.8-fold | 1.4-fold (1.8-fold) | |
Mean (mesophile/thermophile) | 1.7 (2.9) | 9.8 | 5.1 (7.2) |
μg(I) = genomic indel rate. μg(B) = genomic base-pair substitution rate. μg = μg(I)+μg(B).
(Number of values averaged).
(Value excluding a large frameshift hotspot).
(Number of chain-terminating mutations or equivalent).