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. 2009 May 12;10:219. doi: 10.1186/1471-2164-10-219

Table 7.

Major transcription factor families identified by conserved domain annotation of larval transcriptome

Sequences (n) Domain ID Conserved domain description
1 pfam01722 BolA-like protein
0 pfam00313 Cold-shock DNA-binding domain
1 pfam01381 Helix-turn-helix
2 pfam02229 Transcriptional Coactivator p15
0 pfam02671 Paired amphipathic helix repeat
1 pfam02864 Signal transducer and activator of transcription
1 pfam01167 Tub family
4 pfam00046 Homeobox domain
1 pfam00447 HSF-type DNA-binding
2 pfam00870 P53 DNA-binding domain
6 pfam02257 RFX DNA-binding domain
2 pfam01422 NF-X1-type zinc finger protein
3 pfam02319 E2F/DP winged-helix DNA-binding domain
1 pfam00319 SRF-type transcription factor
1 pfam00250 Fork head
12 pfam07716, pfam00170 Basic region leucine zipper & bZIP
9 pfam00010 Helix-loop-helix DNA-binding domain
3 pfam00249 Myb-like DNA-binding domain
12 pfam00642 Zinc finger, CCCH type
5 pfam00096 Zinc finger, C2H2 type