Table 2.
Regulated genes identified in the SSH libraries of thermal exposed Paralvinella pandorae irlandei with significant database matches (E-value above 0.005).
| Homolog (protein); Blastx value | Homolog Species | Insert size (bp) | Accession number | SSH library |
| Respiratory chain | ||||
| Cytochrome c oxidase subunit I; 1e-73 | Littorina saxatilis | 772 | GH196478 | reverse |
| Cytochrome oxidase subunit II; 1e-46 | Lumbricus terrestris | 715 | GH196499 | reverse |
| Cytochrome c oxidase subunit III; 2e-34 | Albula glossodonta | 457 | GH196480 | reverse |
| Cytochrome c oxidase polypeptide Va; 1e-20 | Strongylocentrotus purpuratus | 149 | GH196490 | reverse |
| Ubiquinol-cytochrome c reductase complex; 4e-23 | Mus musculus | 537 | GH196502 | reverse |
| Cytochrome b; 1e-23 | Urechis caupo | 258 | GH196495 | reverse |
| NADH dehydrogenase subunit 1; 4e-48 | Urechis caupo | 571 | GH196493 | reverse |
| NADH dehydrogenase subunit 6; 7e-05 | Clymenella torquata | 190 | GH196501 | reverse |
| Sulfur and oxygen transport | ||||
| Hemoglobin A2c chain; 3e-31 | Arenicola marina | 569 | GH196487 | reverse |
| Hemoglobin B1 chain precursor; 4e-21 | Arenicola marina | 326 | GH196479 | reverse |
| Hemoglobin B2 chain; 1e-12 | Arenicola marina | 516 | GH196491 | reverse |
| Hemoglobin linker LY precursor; 5e-86 | Riftia pachyptila | 529 | GH196505 | reverse |
| Extracellular globin linker L1 precursor; 0.002 | Alvinella pompejana | 335 | GH196504 | reverse |
| Hemoglobin linker L2 precursor; 0.005 | Alvinella pompejana | 727 | GH196483 | forward |
| Intracellular hemoglobin; 5e-41 | Alvinella pompejana | 547 | GH196492 | forward |
| Metabolism | ||||
| Trypsin; 6e-60 | Litopenaeus vannamei | 661 | GH196494 | reverse |
| S-adenosylhomocysteine hydrolase; 2e-66 | Branchiostoma v | 529 | GH196476 | forward |
| Cell communication, membrane receptors, immune system | ||||
| Lipid binding protein 9; 5e-05 | Caenorhabditis elegans | 463 | GH196481 | forward |
| GTP-binding protein (rab7); 7e-89 | Canis familiaris | 641 | GH196489 | forward |
| Xylan endohydrolase isoenzyme, 6e-22 | Arabidopsis thaliana | 455 | GH196472 | reverse |
| Cyclophilin B; 4e-14 | Gallus gallus | 384 | GH196477 | reverse |
| Cytoskeleton production and maintenance | ||||
| Chymotrysin; 4e-11 | Lumbricus rubellus | 230 | GH196484 | forward |
| Secreted nidogen domain protein; 4e-08 | Strongylocentrotus purpuratus | 325 | GH196473 | forward |
| Actin A1; 2e-35 | Haliotis iris | 541 | GH196475 | forward |
| Ribosomal proteins | ||||
| Ribosomal protein L5; 3e-58 | Rattus norvegicus | 423 | GH196497 | reverse |
| Ribosomal protein L28; 6e-07 | Haliotis asinina | 262 | GH196486 | reverse |
| Ribosomal protein L24; 1e-38 | Danio rerio | 439 | GH196482 | forward |
| Ribosomal protein S3; 3e-30 | Crassostrea gigas | 205 | GH196474 | forward |
| Ribosomal protein S16; 2e-41 | Gallus gallus | 337 | GH196500 | forward |
| Ribosomal protein SA; 8e-43 | Xenopus tropicalis | 514 | GH196496 | forward |
| Ribosomal protein P1; 2e-11 | Drosophila yakuba | 444 | GH196498 | forward |
| Unknown function | ||||
| CG14235-PA, isoform A; 1e-27 | Tribolium castaneum | 483 | GH196488 | forward |
| CBG19860; 2e-08 | Caenorhabditis briggsae | 266 | GH196485 | reverse |
| Unidentified sequences | ||||
| 50 sequences | GH196507 to GH196554 | |||
Forward: genes over-expressed at 10°C versus 20°C; Reverse: genes over- expressed at 20°C versus 10°C.