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Number of peaks after peak selection
| Ovarian cancer | Gaucher | |||
| CM10 | Q10 | CM10/Q10 | ||
| Ciphergen A | 776 | 742 | 1518 | 579 |
| Ciphergen B | 268 | 182 | 450 | 201 |
| Ciphergen C | 155 | 79 | 234 | 90 |
| Cromwell A | 383 | 226 | 609 | 501 |
| Cromwell B | 193 | 113 | 306 | 250 |
| Cromwell C | 118 | 70 | 188 | 162 |
Three different settings (A, B, C) were used for both Ciphergen and Cromwell pre-processing.
