Table I.
Species and evidence types cataloged in public databases reporting the mitochondrial localization of proteins
HMPDb, human mitochondrial protein database; AMPDb, Arabidopsis mitochondrial protein database; AMPP, Arabidopsis mitochondrial proteome project; ORMD, organelle map database; YMP, yeast mitochondrial proteome database; YDPM, yeast deletion project and proteomics of mitochondria database.
| Database | Speciesa
|
Evidenceb | Ref. | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Hs | Mm | Rn | Dm | Ce | Nc | Sc | At | |||
| MitoP2 | + | + | − | − | − | + | + | − | M, G, A | 61 |
| MiGenes | + | + | + | + | + | − | + | − | A | 62 |
| MitoResc | + | + | + | + | + | − | − | − | A | 63 |
| MitoProteome | + | − | − | − | − | − | − | − | M, A | 64 |
| HMPDb | + | − | − | − | − | − | − | − | A | |
| AMPDb | − | − | − | − | − | − | − | + | M, A | 65 |
| AMPP | − | − | − | − | − | − | − | + | M | 66 |
| ORMD | − | + | − | − | − | − | − | − | M, G | 29 |
| YMP | − | − | − | − | − | − | + | − | M | 38 |
| YDPM | − | − | − | − | − | − | + | − | M | 40 |
| MitoMiner | + | + | + | + | + | − | + | − | M, G, A | |
Species: Hs, H. sapiens; Mm, M. musculus; Rn, R. norvegicus; Dm, D. melanogaster; Ce, Caenorhabditis elegans; Nc, Neurospora crassa; Sc, S. cerevisiae; and At, A. thaliana.
Evidence type reported for mitochondrial protein localization: identification from mass spectrometry of purified mitochondria (M), localization from GFP tagging (G), or curated annotation from public databases and literature (A).
MitoRes includes metazoan species from UniProt.