Table I.
Proteins significantly down- or up-regulated
Gel IDs are numbers from Fig. 1, and accession numbers are from Swiss-Prot. Abbreviated gene names are as indicated from the Ingenuity Pathways Knowledge Base (14). -Fold change refers to ratios as identified by DeCyder software. Further data on identifications and statistics are presented in supplemental Table 2.
| Gel ID | Abbreviation/gene | Protein accession no. | Name of protein | -Fold change |
|---|---|---|---|---|
| Down-regulated proteins | ||||
| 1 | MBP | P04370 | Myelin basic protein | −3.10 |
| 2 | ETFA | Q3THD7 | Electron transfer flavoprotein subunit α | −2.12 |
| 3 | MTAP | Q9CQ65 | S-Methyl-5-thioadenosine phosphorylase | −2.03 |
| 4 | DSTN | Q9R0P5 | Destrin (actin-depolymerizing factor) | −1.97 |
| 5 | INSL3 | Q5RL10 | Insulin-like 3 | −1.92 |
| 6 | ABAT | P61922 | 4-Aminobutyrate aminotransferase | −1.76 |
| 7 | FABP5 | Q05816 | Fatty acid-binding protein, epidermal | −1.65 |
| 8 | ALDH5A1 | Q8BWF0 | Succinate-semialdehyde dehydrogenase | −1.56 |
| 9 | VDAC1 | Q60932 | Voltage-dependent anion-selective channel protein 1 | −1.50 |
| 10 | FIS1 | Q9CQ92 | Mitochondrial fission 1 protein | −1.50 |
| 11 | ESD | Q9R0P3 | S-Formylglutathione hydrolase | −1.48 |
| 12 | ARPC4 | P59999 | Actin-related protein 2/3 complex subunit 4 | −1.48 |
| 13 | HINT3 | Q9CPS6 | Histidine triad protein 4 | −1.47 |
| 14 | FABP5 | Q05816 | Fatty acid-binding protein, epidermal | −1.46 |
| 15 | DPYSL2 | O08553 | Dihydropyrimidinase-related protein 2 | −1.44 |
| 16 | HAGH | Q99KB8 | Hydroxyacylglutathione hydrolase | −1.42 |
| 17 | DBI | P31786 | Acyl-CoA-binding protein | −1.39 |
| 18 | CNP | P16330 | 2′,3′-Cyclic-nucleotide 3′-phosphodiesterase | −1.39 |
| 19 | CPLX1 | P63040 | Complexin | −1.38 |
| 20 | TST | P52196 | Thiosulfate sulfurtransferase | −1.32 |
| 21 | NUDT2 | P56380 | Nucleoside diphosphate-linked moiety X type motif 2 | −1.31 |
| 22 | ANXA5 | P48036 | Annexin A5 | −1.30 |
| 23 | RPS27A | P62991 | Ubiquitin | −1.30 |
| 24 | APOA1BP | Q8K4Z3 | ApoA-I-binding protein | −1.29 |
| 25 | GRB2 | Q60631 | Growth factor receptor-bound protein 2 | −1.25 |
| Up-regulated proteins | ||||
| 26 | IDE | Q9JHR7 | Insulin-degrading enzyme | 1.31 |
| 27 | DNM1 | Q05193 | Dynamin | 1.31 |
| 28 | PGAM1 | Q9DBJ1 | Phosphoglycerate mutase | 1.32 |
| 29 | ACTG1 | Q3TSB7 | Actin-γ | 1.34 |
| 30 | SUCLA2 | Q9Z2I9 | Succinyl-CoA ligase | 1.34 |
| 31 | STIP1 | Q60864 | STI (stress-induced) phosphoprotein 1 | 1.35 |
| 32 | CYC1 | Q9D0M3 | Cytochrome c1, heme protein, mitochondrial precursor | 1.35 |
| 33 | SOD2 | P09671 | Mn-SOD | 1.36 |
| 34 | C3ORF10 | Q91VR8 | Brick 1 | 1.37 |
| 35 | CAPNS1 | O88456 | Calpain smaller subunit | 1.40 |
| 36 | MLF2 | Q99KX1 | Myeloid leukemia factor 2 | 1.40 |
| 37 | AKR1A1 | Q9JII6 | Alcohol dehydrogenase (NADP+) | 1.42 |
| 38 | MDH1 | P14152 | Malate dehydrogenase | 1.43 |
| 39 | COPS4 | O88544 | COP9 (signalosome complex) subunit 4 | 1.43 |
| 40 | CKB | Q04447 | Creatine kinase B-type | 1.44 |
| 41 | YWHAG | P61982 | 14-3-3 protein γ | 1.44 |
| 42 | BLVRA | Q9CY64 | Biliverdin reductase A precursor | 1.47 |
| 43 | COPS8 | Q8VBV7 | COP9 (signalosome complex) subunit 8 | 1.47 |
| 44 | TPRG1L | Q9DBS2 | Tumor protein p63-regulated gene 1-like protein | 1.49 |
| 45 | MDH1 | P14152 | Malate dehydrogenase | 1.52 |
| 46 | IDH1 | O88844 | Isocitrate dehydrogenase (NADP) cytoplasmic | 1.52 |
| 47 | ERP29 | P57759 | Endoplasmic reticulum protein 29 | 1.53 |
| 48 | ACTG1 | Q3TSB7 | Actin-γ | 1.53 |
| 49 | ACTG1 | Q3TSB7 | Actin-γ | 1.56 |
| 50 | CKB | Q04447 | Creatine kinase B-type | 1.62 |
| 51 | COPS8 | Q8VBV7 | COP9 (signalosome complex) subunit 8 | 1.71 |
| 52 | UCHL1 | Q9R0P9 | Ubiquitin carboxyl-terminal hydrolase isozyme L1 | 1.75 |
| 53 | UBE2L3 | P68037 | Ubiquitin-conjugating enzyme E2 L3 | 1.81 |