Table 1.

10 K breakpoint recovery results

	i Linker		xPedPhase		Block-Extension
Pedigree	Precision	Recall	Precision	Recall	Precision	Recall
2-2	0.994	0.936	0.971	0.952	0.253	1.000
2–3	0.982	0.965	0.964	0.966	0.326	0.999
2-3-1	0.985	0.965	0.961	0.972	0.214	0.999
2-3-2	0.989	0.962	0.955	0.972	0.151	0.995
2-3-3	0.972	0.968	0.935	0.976	0.177	0.996
2-3-5	0.977	0.971	0.872	0.989	0.160	0.997
2-4-3	0.984	0.969	0.924	0.978	0.203	0.999
2-5-4	0.989	0.949	0.882	0.976	0.231	0.999
2-5-5	0.991	0.970	0.846	0.989	0.204	0.998
2-6-5	0.986	0.956	0.867	0.984	0.212	0.999
Average	0.984	0.964	0.912	0.978	0.213	0.998

Breakpoint recovery results: Average breakpoint recovery precision and recall by i Linker, xPedPhase, and Block-Extension on 10 K genotype datasets.