Table 2.
Comparative Properties of Mammalian DNA Glycosylases for Oxidized Bases
| Properties | Nth Type | Nei Type | ||
|---|---|---|---|---|
| OGG1 | NTH1 | NEIL1 | NEIL2 | |
| Size (kD) | 38 | 36 | 43 | 36 |
| DNA structure | dsDNA | dsDNA | ssDNA; Bubble, Fork, and dsDNA | ssDNA; Bubble, Fork, and dsDNA |
| Downstream Enzyme | APE1 | APE1 | PNK | PNK |
| Conserved motif | HhH | HhH | H2TH | H2TH |
| Catalytic residue | Lys 249 | Lys 212 | Pro1 | Pro1 |
| Cell Cycle Dependence | None | None | S-phase Specific | None |
| Dispensable Sequences | C-terminal 20 & N-terminal 10 residues | N-terminal 80 residues | C-terminal 101 residues | C-terminal 10 residues |
| AP lyase | β-elimination (3′ PUA) | βδ-elimination (3′ phosphate) | ||
ds, double stranded; ss, single-stranded; HhH, helix-hairpin-helix; H2TH, helix-2-turn-helix.