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. Author manuscript; available in PMC: 2010 Mar 1.
Published in final edited form as: Proteins. 2009 Mar;74(4):1041–1049. doi: 10.1002/prot.22325

Table I.

Summary of crystal parameters, data collection, and refinement statistics for SSO154 (PDB: 2fna).

Space group P21
Unit cell parameters a=55.36Å, b=108.35Å, c=70.57Å, β=100.3°
Data collection λ1 MADSe λ2 MADSe
  Wavelength (Å) 0.9537 0.9800
  Resolution range (Å) 29.20-2.00 29.20-2.00
  Number of observations 176,708 172,434
  Number of unique reflections 53,921 53,545
  Completeness (%) 97.7 (96.0)a 97.0 (92.0)a
  Mean I/σ (I) 12.6 (2.7)a 12.0 (2.4)a
  Rsym on I (%) 0.075 (0.363)a 0.083 (0.379)a
  Highest resolution shell (Å) 2.11-2.00 2.11-2.00
Model and refinement statistics
  Resolution range (Å) 29.20-2.00 Data set used in refinement λ1 MADSe
  No. of reflections (total) 53,894b Cutoff criteria |F|>0
  No. of reflections (test) 2,733 Rcryst 0.174
  Completeness (% total) 97.5 Rfree 0.226
Stereochemical parameters
Restraints (RMS observed)
  Bond angle (°) 1.43
  Bond length (Å) 0.014
  Average isotropic B-value (Å2) 42.5
  ESU based on Rfree (Å) 0.16
Protein residues/atoms 704 / 5743
Water molecules / ions / ligands / cryoprotectant 347 / 2 / 2 / 7
a

Highest resolution shell.

b

Typically, the number of unique reflections used in refinement is slightly less than the total number that were integrated and scaled. Reflections are excluded due to systematic absences, negative intensities, and rounding errors in the resolution limits and cell parameters.

ESU = Estimated overall coordinate error 20,21.

Rsym = ∑|Ii-<Ii>| / ∑|Ii| where Ii is the scaled intensity of the ith measurement and <Ii> is the mean intensity for that reflection.

Rcryst = ∑| |Fobs|-|Fcalc| | / ∑|Fobs| where Fcalc and Fobs are the calculated and observed structure factor amplitudes, respectively.

Rfree = as for Rcryst, but for 5.1% of the total reflections chosen at random and omitted from refinement