Table 3.
Immunoglobulin gene usage for variable heavy chains of human anti-Env mAbs
| mAb | Cells | IGHV | IGHD | D-RF | IGHJ | Reference |
|---|---|---|---|---|---|---|
| Anti- CD4bd mAbs | ||||||
| b12a | Phage | 1-3*01 | 2-21 | 2 | 6 | (Barbas et al., 1993) |
| GP44 | EBV | 1-46*01 | 3-16 | 3 | 4 | (van der Donk et al 1994) |
| GP68 | “ | 1-69*01 | 3-16 | 2 | 4 | (van der Donk et al 1994) |
| S1-1 | Hybridoma | 1-69*09 | 2-2 | 3 | 4 | (Moran et al., 1993) |
| 21h | EBV | 3-11*03 | 4-17 | 3 | 5 | (Bagley et al., 1994) |
| b3a | “ | 3-15*06 | 3-9 | 2 | 6 | (Barbas et al., 1993) |
| b13a | “ | 3-30*04 | 3-9 | 2 | 4 | (Barbas et al., 1993) |
| m14 | “ | 4-30-4*01 | 3-10 | 1 | 4 | (Zhang et al., 2004) |
| 15e | “ | 4-39*02 | 2-8 | 1 | 6 | (Bagley et al., 1994) |
| F105 | Hybridoma | 4-59*01 | 4-17 | 2 | 5 | (Marasco et al., 1992) |
| GP13 | EBV | 5-a*03 | 3-9 | 2 | 6 | (van der Donk et al 1994) |
| Anti-CD4i mAbs | ||||||
| 411gb | EBV | 1-24*01 | 1-26 | 1 | 4 | (Huang et al., 2004) |
| X5 | Phage | 1-69*01 | 3-22 | 2 | 4 | (Huang et al., 2004) |
| E51c | EBV | 1-69*01 | 2-2 | 3 | 6 | (Huang et al., 2004) |
| 412dc | “ | 1-69*01 | 4-4 | 2 | 2 | (Huang et al., 2004) |
| 47e3 | “ | 1-69*01 | 4-17 | 2 | 6 | (Huang et al., 2004) |
| 23eb | “ | 1-69*06 | 3-3 | 2 | 6 | (Huang et al., 2004) |
| 17b6 | “ | 1-69 | nd | nd | 1 | (Thali et al., 1992) |
| Sb1d,f | Phage | 1-69 | nd | nd | 6 | (Huang et al., 2004) |
| C12d,f | “ | 1-69 | nd | nd | 4 | (Huang et al., 2004) |
| m16f | “ | 1-69 | nd | nd | 6 | (Huang et al., 2004) |
| 16c | “ | 1-f*01 | 5-12 | 3 | 4 | (Huang et al., 2004) |
| 48d | EBV | 1-f*01 | 1-26 | 2 | 3 | (Thali et al., 1992) |
| Anti-gp41 mAbs | ||||||
| DaB2B3 | EBV | 1-46*01 | 3-16 | 3 | 3 | (David et al., 1995b) |
| Ab 31 | Phage | 1-46*01 | 2-2 | 1 | 3 | (de Haard et al., 1998) |
| 246-D+ | Hybridoma | 1-69*01 | 6-19 | 2 | 4 | (Xu et al., 1991) |
| 181-D+ | “ | 1-69*01 | 3-16 | 1 | 6 | (Xu et al., 1991) |
| 50-69D+ | “ | 1-69*01 | 2-21 | 2 | 4 | (Gorny et al., 1989) |
| No.86 | “ | 1-69*06 | 3-9 | 2 | 4 | (Moran et al., 1993) |
| 1281+ | “ | 1-69*06 | 3-9 | 1 | 5 | (Gorny et al., 2000) |
| 126-7+,e,h | “ | 1-69*06 | 2-2 | 3 | 4 | (Xu et al., 1991) |
| 167-7+ | “ | 1-69*09 | 3-10 | 3 | 4 | (Xu et al., 1991) |
| 240-D+ | “ | 1-69*10 | 3-9 | 2 | 5 | (Xu et al., 1991) |
| 4E10f | “ | 1-69 | 3-16 | nd | 1 | (Kunert et al., 2004) |
| F240 | “ | 3-11*01 | 3-22 | 2 | 5 | (Cavacini et al., 1998) |
| 1379+ | “ | 3-11*03 | 4-17 | 1 | 4 | (Gorny et al., 2000) |
| NG3B7 | EBV | 3-23*04 | 1-26 | 3 | 3 | (David et al., 1995b) |
| 1342+ | Hybridoma | 3-23*04 | 3-10 | 3 | 4 | (Gorny et al., 2000) |
| 3D6 | “ | 3-9*01 | 3-22 | 2 | 3 | (Felgenhauer et al. 1990) |
| 120-16e | EBV | 4-30-2*01 | 5-12 | 3 | 2 | (Andris et al., 1991) |
| 1367+ | Hybridoma | 4-30-4*01 | 2-2 | 2 | 6 | (Gorny et al., 2000) |
| Z13 | Phage | 4-59*03 | 3-16 | 3 | 6 | (Zwick et al., 2001) |
| 98-6e | EBV | 4-61*02 | 4-23 | 3 | 4 | (Andris et al., 1991) |
| 2F5g | Hybridoma | 2-5*10 | nd | nd | 6 | (Kunert et al., 1998) |
These mAbs were derived from five HIV-infected individuals;
only VH nucleotide sequence available;
nucleotide sequence is not available;
mAb 126-7 was previously known as 126-6;
the mAbs sequenced in our laboratory for this study; nd – not defined. D-RF, D gene reading frame.