Table 1.
Functional group | Gene set name | No. of related sets |
No of members in gene set (range) |
FDR q value (range) |
Vesicle trafficking | Membrane fusion | 2 | 27–52 | 0.022–0.026 |
Vesicle transport | 9 | 16–348 | 0.002–0.149 | |
Vesicle docking during exocytosis | 1 | 21 | 0.141 | |
Transcription/translation | Ribosome function | 4 | 69–89 | 0.042–0.179 |
mRNA processing | 5 | 157–452 | 0.056–0.166 | |
Transcription from RNA pol III promoter | 1 | 25 | 0.089 | |
mRNA catabolism | 2 | 17–23 | 0.027–0.125 | |
translation | 3 | 30–157 | 0.012–0.062 | |
Protein transport/metabolism | Protein transport | 9 | 17–294 | 0.012–0.129 |
Ubiquination/proteolysis | 11 | 133–448 | 0.013–0.024 | |
Protein folding | 1 | 195 | 0.003 | |
Carboxylic acid metabolism | 7 | 17–410 | 0.087–0.195 | |
Aspartate family amino acid metabolism | 1 | 18 | 0.016 | |
Amine metabolism | 2 | 55–57 | 0.142–0.152 | |
Electron transport chain | Coenzyme metabolism | 4 | 85–159 | 0.007–0.029 |
Nucleotide metabolism | 16 | 53–178 | 0.014–0.126 | |
ATP metabolism | 9 | 36–490 | 0.012–0.192 | |
Oxidative phosphorylation | 4 | 21–63 | <0.001 | |
Electron transport | 1 | 289 | 0.022 | |
Mitochondrial membrane | 2 | 19–21 | 0.027–0.149 | |
Glycolysis | Aerobic respiration | 7 | 22–32 | 0.005–0.016 |
Glucose metabolism | 13 | 20–138 | 0.005–0.079 | |
Oxidative stress | Response to oxidative stress | 2 | 44–63 | 0.069–0.164 |
Peroxisome organization and biogenesis | 1 | 17 | 0.164 | |
Cell cycle | Mitotic cell cycle | 5 | 17–60 | 0.077–0.144 |
Induction of apoptosis by intracellular signals | 1 | 20 | 0.067 | |
Lipid metabolism | Sphingomyelin synthesis | 3 | 17–41 | 0.035–0.187 |
Lipid modification | 2 | 15–19 | 0.032–0.041 | |
Phospholipid metabolism | 6 | 54–427 | 0.012–0.054 | |
Lipoprotein metabolism | 3 | 29–42 | 0.027–0.069 | |
Glycerolipid metabolism | 6 | 19–39 | 0.013–0.180 | |
Others | Iron compound metabolism | 6 | 15–52 | 0.002–0.053 |
Autophagy | 1 | 16 | 0.062 | |
Polysaccharide biosynthesis | 1 | 18 | 0.120 | |
Biopolymer biosynthesis | 1 | 18 | 0.128 | |
Telomere maintenance | 1 | 21 | 0.132 | |
Respiratory gaseous exchange | 1 | 17 | 0.188 | |
Regulation of Wnt receptor signalling | 1 | 15 | 0.188 | |
Vitamin metabolism | 1 | 48 | 0.188 |
Functional gene sets are shown which show enrichment in the list of genes positively correlated with a template showing peak expression in the 15–25 age range. Related gene sets as defined by leading edge analysis are grouped together in column 2 and the range of q values for these gene sets is indicated. Gene sets/groups of gene sets which are functionally associated but are composed of non-overlapping genes in the leading edge are indicated by headings in column 1. A full detailed list of significant gene sets can be found in Additional File 3.