Table 3. MLST and phylogenetic group assignments for ESBL-producing E. coli isolates.
Isolate ID | ST | Clonal complex | Phylogenetic groupa |
63541 | ST1199 | – | B1 |
63546 | ST533 | – | A0b |
63560 | ST1140 | – | D |
63562 | ST156 | ST156 | A0 |
63574 | ST90 | ST23 | A |
63606 | ST1142 | – | A0 |
63633 | ST681 | – | B2 |
63638 | ST681 | – | B2 |
63652 | ST1134 | – | A0 |
63654 | ST1143 | – | D |
63657 | ST1135 | – | D |
63659 | ST1144 | ST746 | A0 |
63688 | ST1140 | – | D |
63706 | ST746 | ST746 | A0 |
63725 | ST1143 | – | D |
63727 | ST351 | – | A0 |
Phylogentic group as determined by the triplex PCR method (ref Clermont).
A0 denotes that all three DNA targets of the triplex PCR failed to amplify.