Table 2.
gi number | H2A variant% | #AA | MW#(Da) | 6*Q/T** | 10 A/V | 16 S/T | 37−38 | 40 A/S | 51 M/L | 87 V/I | 99 K/R/G | 123/4 H | 125 | 126 A/T | 127 | 128 | 129 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gi|121959 | H2AFC/D/I/N/P | 129 | 14002 | Q | A | T | GN | A | L | I | K | H | K | A | K | G | K |
gi|4504251 | H2AFO | 129 | 14006 | Q | A | S | GN | A | M | I | K | H | K | A | K | G | K |
gi|55930954 | H2AFL | 129 | 14016 | Q | A | S | GN | A | L | I | R | H | K | A | K | G | K |
gi|121978 | H2AFG | 129 | 14018 | Q | A | T | GN | S | L | I | K | H | K | A | K | G | K |
gi|19557656 | H2AFM* | 129 | 14046 | Q | A | T | GN | S | L | I | R | H | K | A | K | G | K |
gi|121986 | H2AFM | 129 | 14083 | Q | A | T | AH | S | L | I | R | H | K | A | K | G | K |
gi|12654707 | H2A alt | 129 | 14032 | Q | A | S | GN | S | L | I | R | H | K | A | K | G | K |
gi|10800144 | H2AFE | 127 | 13847 | Q | A | T | GN | A | L | I | K | H | K | T | K | Δ | Δ |
gi|49659927 | H2AFR | 128 | 13899 | Q | A | S | GN | A | M | I | K | Δ*** | K | A | K | S | K |
gi|28195394 | H2A_NP_7782.35.1 | 129 | 13906 | Q | A | S | GN | A | L | V | G | H124K**** | P | G | K | N | K |
gi|18105045 | H2AFS | 127 | 13817 | Q | A | T | GN | A | L | I | K | H | K | A | K | Δ | Δ |
gi|4504253 | H2AFX | 142 | 15055.5 | T | A | S | GN | A | L | I | G | X | |||||
gi|29553970 | H2AFJ.2 | 128 | 13930 | Q | V | S | GN | A | L | I | K | ΔΔQ | K | T | K | S | K |
gi|8922758 | H2AFJ.1 | 150 | 16020 | Q | V | S | GN | A | L | I | K | X | |||||
Less Homology | 14 | 38 | 127 | ||||||||||||||
A/T | T/S | A/V | |||||||||||||||
gi|4504255 | H2AFZ | 127 | 13422 | T | T | A | |||||||||||
gi|6912616 | H2AFV.1 | 127 | 13420 | A | S | V |
Residue site
Possible amino acid residue at a specific site
Mutation site
Residue substitution
The sequences of H2A variants were retrieved from NHGRI Histone Database.
All the H2A MWs (except H2AFZ) were calculated with acetylation at N-terminal serine.