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. Author manuscript; available in PMC: 2009 Jun 9.
Published in final edited form as: J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Jan 7;850(1-2):440–454. doi: 10.1016/j.jchromb.2006.12.037

Table 2.

Sequence variation in human H2A variants

gi number H2A variant% #AA MW#(Da) 6*Q/T** 10 A/V 16 S/T 37−38 40 A/S 51 M/L 87 V/I 99 K/R/G 123/4 H 125 126 A/T 127 128 129
gi|121959 H2AFC/D/I/N/P 129 14002 Q A T GN A L I K H K A K G K
gi|4504251 H2AFO 129 14006 Q A S GN A M I K H K A K G K
gi|55930954 H2AFL 129 14016 Q A S GN A L I R H K A K G K
gi|121978 H2AFG 129 14018 Q A T GN S L I K H K A K G K
gi|19557656 H2AFM* 129 14046 Q A T GN S L I R H K A K G K
gi|121986 H2AFM 129 14083 Q A T AH S L I R H K A K G K
gi|12654707 H2A alt 129 14032 Q A S GN S L I R H K A K G K
gi|10800144 H2AFE 127 13847 Q A T GN A L I K H K T K Δ Δ
gi|49659927 H2AFR 128 13899 Q A S GN A M I K Δ*** K A K S K
gi|28195394 H2A_NP_7782.35.1 129 13906 Q A S GN A L V G H124K**** P G K N K
gi|18105045 H2AFS 127 13817 Q A T GN A L I K H K A K Δ Δ
gi|4504253 H2AFX 142 15055.5 T A S GN A L I G X
gi|29553970 H2AFJ.2 128 13930 Q V S GN A L I K ΔΔQ K T K S K
gi|8922758 H2AFJ.1 150 16020 Q V S GN A L I K X
Less Homology 14 38 127
A/T T/S A/V
gi|4504255 H2AFZ 127 13422 T T A
gi|6912616 H2AFV.1 127 13420 A S V
*

Residue site

**

Possible amino acid residue at a specific site

***

Mutation site

****

Residue substitution

%

The sequences of H2A variants were retrieved from NHGRI Histone Database.

#

All the H2A MWs (except H2AFZ) were calculated with acetylation at N-terminal serine.