Table 3.

Comparing GreenGenie2 and GeneMark.hmm-ES 3.0 in gb140 catalog

		GreenGenie2		GeneMark.hmm-ES 3.0
		Sensitivity	Specificity	Sensitivity	Specificity
Gene Level	(n = 140)	0.51	0.47	0.31	0.24
Exon Level	(n = 1145)	0.83	0.83	0.79	0.74
Initial Exons	(n = 133)	0.65	0.60	0.50	0.40
Internal Exons	(n = 870)	0.87	0.88	0.84	0.84
Terminal Exons	(n = 133)	0.82	0.75	0.78	0.63
Single Exon	(n = 7)	0.71	0.62	0.00	0.00
Nucleotide Level	(n = 713682)	0.93	0.92	0.91	0.89