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. Author manuscript; available in PMC: 2009 Jun 11.
Published in final edited form as: Comput Sci Eng. 2007;9(4):50–60. doi: 10.1109/MCSE.2007.74

Figure 9.

Figure 9

Adding a partial differential equation (PDE) solver to CompuCell3D with Biologo. (a) A hybrid model of angiogenesis,9 derived from the Gamba-Serini PDEs,11 implemented in Biologo as an evolver of chemical fields. (b) Instantiation of this solver in the CompuCell3D configuration file. The CompuCell3D chemotaxis plug-in also accepts ChemotaxisByType tags with attributes for cell type and associated Lambda values.