Table 2.

Homology between Brachypodium supercontigs and homoeologous groups of wheat

Wheat homoeologous group	bEST mapped contig	Number of Brachypodium supercontigs showing orthology*	Supercontig showing maximum homology
1	55	11 (0–4,7–10,12,14)	2 (32.7%)
2	69	11 (0–6,9,10,14,15)	0 (44.9%)
3	63	11 (0–2,4–6,8–10,12,13)	4 (33.3%)
4	77	10 (0–3,6–8,11,15,189)	1 (54.5%)
5	68	11 (0–3,5–8,12,15,525)	0 (27.9%)
6	54	11 (0–9,11)	5 (42.5%)
7	63	15 (0–9,11,13,14,538)	0 (19.0%)

*Designated numbers for supercontigs are given in a parenthesis in each row