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. Author manuscript; available in PMC: 2009 Jun 12.
Published in final edited form as: Int J Cancer. 2008 Jun 15;122(12):2876–2879. doi: 10.1002/ijc.23471

TABLE II.

Allele frequencies by prostate cancer affection status and Family-Based Association Test (FBAT) results

Marker Region1 Major > minor
allele		 Minor allele frequency in FBAT2
Affected men
(n = 542)		 Unaffected men
(n = 473)		 N3 Z-score p-value
rs13254738 2 A>C 0.34 0.35 191 −0.29 0.78
rs6983561 2 A>C 0.08 0.06 49 2.21 0.03
rs6983267 3 G>T 0.41 0.43 189 2.07 0.04
rs7000448 3 C>T 0.41 0.40 187 0.72 0.47
DG8S737 1 −84 0.08 0.07 62 0.71 0.48
rs10090154 1 C>T 0.13 0.13 106 0.06 0.95
1

Defined by Haiman et al.4

2

Under an additive model for the minor allele, except for rs6983267 (major allele).

3

Number of informative families.

4

Minor allele after collapsing alleles of DG8S737, i.e., −8 versus all others.