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. 2009 Apr 30;9:87. doi: 10.1186/1471-2148-9-87

Figure 4.

Figure 4

Stepwise graph-based clustering of the Ancestral Repeats data. The stepwise clustering of contexts using the graph-based clustering approach shows, from top to bottom, the subsequent merges of contexts for the Ancestral Repeats dataset. The starting point is a full (96-parameter) context-dependent model, shown in white. The optimal model has 8 clusters and 48 parameters.