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. 2009 Jun 16;10(Suppl 6):S5. doi: 10.1186/1471-2105-10-S6-S5

Table 1.

Quantitative report of the PPNEMA updating procedure

Number of selected GenBank entries 884
Number of PPNEMA Groups considered 245
Number of TP in Normal Search 1294
Number of FN in Normal Search 184
Number of TP after Scan-RegExpBlasting 155
Number of True Negative (TN) 29

Data refer to application of entire RegExpBlasting procedure, as described in Figure 2, with following fixed parameters: minl = 60, w = 20, step = 5 and cut-off = 0.85.