Table 3.

Number of mapped markers per chromosome.

Chromosome	Genome A		Genome B		Genome D		Total
	SFPa	SSR	SFP	SSR	SFP	SSR	SFP	SSR
1	25	6	154b	12b	19	6	198	24
2	6	4	92	29	23	10	121	43
3	24	12	70	18	11	7	105	37
4	59	13	30	11	2	3	91	27
5	35	13	74	23	7	5	116	41
6	52	8	61	16	12	5	125	29
7	38	16	68	24	15	16	121	56
Unknown							46	12
Total	239	72	549	133	89	52	923	269

^a SFP denotes an Affymetrix GeneChip probe set with at least one polymorphic probe.

^b Genomic in situ hybridization indicated that Ning 7840 carries a translocation where the short arm of wheat chromosome 1B is replaced by the short arm of rye chromosome 1R.