Skip to main content
. 2008 Sep 19;29(3):244–251. doi: 10.1159/000157627

Table 2.

TRPC1 SNPs and MAFs in GoKinD Caucasian type 1 diabetic subjects with and without diabetic nephropathy

dbSNP rsID
SNP type
Position in chr. 3
Genomic/cDNA identity
Location
Group
n
MAF
rs953239 M= A/C 143928895 g.48941351A>C intron1 T1DwithDN 576 C0.419
T1Dwithout DN
598
C0.409
rs7638459 Y= C/T 143972841 g.48985297T>C intron3 T1DwithDN 576 C0.213
T1Dwithout DN
599
C0.191
rs17624218 Y= C/T 143983170 g.48995626T>C intron5 T1DwithDN 577 C0.210
T1Dwithout DN
599
C0.217
rs7621642 R= A/G 143986295 g.48998751G>A exon6 T1DwithDN 576 A0.213
c.1054G>A(S306S)
T1D without DN
596
A0.191
rs2033912 W= A/T 143999057 g.49011513A>T intron8 T1DwithDN 578 T0.213
T1Dwithout DN
599
T 0.191
rs3821647 R= A/G 144006039 g.49018495G>A exon11 T1DwithDN 578 A0.189
c.2065G>A(T643T)
T1D without DN
599
A0.167
rs7610200 R= A/G 144007548 g.49020004G>A exon12 T1DwithDN 578 A0.192
c.2197G>A(R687R) T1D without DN 599 A0.168

T1D = Type 1 diabetes; DN = diabetic nephropathy; n = number of samples genotyped; MAF = minor allele frequency.

M = Adenine or cytosine; Y = cytosine or thymine; R = adenine or guanine; W = adenine or thymine.

References: NT_005612.15, NM_003304 and NP_003295. M, Y, R and W are International Union of Pure and Applied Chemistry (IUPAC) codes used in FASTA sequences at the SNP position.