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Sensitivity of DNase-chip, as assessed against gold-standard DNase I hypersensitive sites derived from MPSS clusters (n = 130 for CD4+ T cells, n = 81 for GM06990 cells)
| Cell line | DNase I concentrations | Total number of sites detected by DNase-chip | Gold-standard sites detected by DNase-chip | Sensitivity |
|---|---|---|---|---|
| CD4+ T cells | ABC + AB + AC + BC + C | 1,423 | 101/130 | 78% |
| Averaged | 1,264 | 112/130 | 86% | |
| GM06990 cells | ABC + AB + AC + BC + C | 1,463 | 61/81 | 75% |
| Averaged | 1,100 | 72/81 | 89% |
