Table 2.
Comparison of E. amylovora and E. tasmaniensis TCST and other signal transduction genesa
| Geneb | Length of deduced Amino acidc | aa Identity/Similarity (%)d | Geneb | Length of deduced Amino acidc | aa Identity/Similarity (%)d |
| arcB | 779 | 93/95 | arcA | 238 | 96/99 |
| baeS | 461 | 89/93 | baeR | 235 | 88/94 |
| grrS (barA) | 909 | 91/94 | grrA (Eta_20780) | 219 | 94/98 |
| cpxA1 | 459 | 96/98 | cpxR1 | 233 | 95/97 |
| cpxA2 (Eta_10960) | 450 | 82/88 | cpxR2 (Eta_10950) | 226 | 88/93 |
| dcuS | 546 | 79/86 | dcuR | 239 | 86/93 |
| envZ | 449 | 95/97 | ompR | 239 | 100/100 |
| hrpX | 494 | 89/93 | hrpY | 213 | 94/96 |
| kdpD | 890 | 95/97 | kdpE (Eta_23200) | 226 | 89/92 |
| luxQ (Eta_11320) | 419 (420) | 89/93 | luxP (Eta_11350) | 258 | 74/89 |
| narQ | 330 | N/A | narP | 209 (210) | 71/83 |
| ntrB | 349 | 96/98 | ntrC | 469 | 98/98 |
| phoQ | 481 | 92/96 | phoP | 222 | 95/98 |
| phoR | 437 | 88/92 | phoB | 229 | 96/98 |
| pmrB | 350 | 81/89 | pmrA | 219 | 94/98 |
| rcsC | 885 (890) | 88/93 | rcsB | 215 | 99/100 |
| rcsD (yojN) | 987 (951) | 84/91 | eamR (sdiA) | 240 | 84/92 |
| rstB | 426 | 92/96 | rstA | 242 | 93/97 |
| ybjN (Eta_21780) | 159 | 91/96 | Spk1 (Eta_06360) | 468 | 91/92 |
| yddV (hmsT) | 365 | 81/88 | yegE | 848 (877) | 78/88 |
| yehU | 564 (562) | 84/90 | yehT | 239 | 80/89 |
| yfhK | 463 (475) | 87/91 | yfhA (Eta_10100) | 444 | 93/96 |
| yoaD (rtn) | 516 (523) | 81/89 | yciR (Eta_30620) | 818 (820) | 82/91 |
a Sequences for E. amylovora TCST genes are from the whole genomic sequence of E. amylovora http://www.sanger.ac.uk/Projects/E_amylovora/. One TCTS system (ypdAB) in E. tasmaniensis is not present in E. amylovora Ea273. Two sets of CheABRWYZ exist in E. amylovora, but only one set in E. tasmaniensis.
b In parentheses is gene or gene number for the corresponding gene in E. tasmaniensis.
c The number in parentheses is the length of deduced amino acid for the corresponding protein in E. tasmaniensis which differs from those in E. amylovora.
d All data are the highest aa similarity and identify found in NCBI database as of today except for HrpXY which share the highest aa identity/similarity to those in E. pyrifoliae (98/99%; 99/99%, respectively). N/A: not available.