Table 10.
HIV.. | ..A1 | ..B1 | ..C1 | ..D1 | ..E1 | ..A2 | ..B2 | ..C2 | ..D2 | ..E2 |
HIVA1 | 4.56% | 1.90% | 0.36% | 0.27% | 1.60% | 3.45% | 0.43% | 0.41% | 0.43% | 0.29% |
HIVB1 | 4.29% | 0.31% | 0.19% | 0.93% | 0.73% | 0.53% | 0.31% | 0.16% | 0.28% | |
HIVC1 | 3.23% | 0.14% | 0.12% | 0.29% | 0.24% | 0.25% | 0.25% | 0.26% | ||
HIVD1 | 2.05% | 0.17% | 0.28% | 0.12% | 0.31% | 0.20% | 0.22% | |||
HIVE1 | 3.50% | 1.58% | 0.20% | 0.17% | 0.22% | 0.12% | ||||
HIVA2 | 4.97% | 0.54% | 0.53% | 0.67% | 0.32% | |||||
HIVB2 | 2.56% | 0.62% | 0.22% | 0.63% | ||||||
HIVC2 | 1.86% | 0.53% | 0.55% | |||||||
HIVD2 | 1.53% | 0.41% | ||||||||
HIVE2 | 2.70% |
There are 208 possible octamers.
The fractions of these octamers that match to each OSRE HIV-1 rule, and to more than one rule, are shown here. The diagonal elements in the table show the fraction of the possible octamers that match one rule. The off-diagonal elements in the table show what fraction of the octamers that match both rules.