Table 3.

Consensus rules for the HIV-1 PR data sets.

HIV-1 PR 746 peptide set		HIV-1 PR 1625 peptide set
HIVA1	P3 ∉ {N}	HIVA2	P4 ∉ {N,C,I}
	P2 ∉ {Q,L,K,S}		P2 ∉ {Q,K,P,S}
	P1 ∈ {G,L,M,F,Y}		P1 ∈ {L,M,F,Y}
	P1' ∈ {H,I,L,M,F,P,Y,V}		P1' ∉ {R,N,D,C,Q,E,K,S,T}
	P2' ∉ {R,N,D,G,H,K,P,S}		P2' ∉ {R,N,D,G,H,K}
			P3' ∉ { K }
HIVB1	P1 ∉ {Q,K,T,V}	HIVB2	P4 ∉ {N,C,I,K,M,F,W,Y}
	P1' ∈ {L,F,P,Y}		P3 ∉ {N,C,V}
	P2' ∉ {R,N,D,G,H,K,S,T,Y}		P2 ∉ {K}
	P3' ∉ {N,H,I,L,K,P,S}		P1 ∉ {R,Q,E,K,T}
	P4' ∉ {N,Q,I,M,V}		P1' ∉ {R,N,D,C,Q,E,K,S,T}
			P2' ∈ {A,C,Q,E,I,L,S,V}
			P3' ∈ {A,C,Q,M,F,Y}
HIVC1	P2 ∉ {Q,L,K,S}	HIVC2	P4 ∉ {N,C,I,K,M,F,W,Y}
	P1 ∉ {K,T,V}		P3 ∉ {N,V}
	P2' ∈ {E}		P2 ∈ {A,C,I,M,F,V}
	P3' ∉ {N}		P1 ∉ {R,Q,E,K,P,T}
			P1' ∉ {R,N,D,C,Q,E,K,S,T}
			P2' ∈ {A,C,Q,I,L,S,V}
			P3' ∉ {N,K,P}
HIVD1	P3 ∉ {N,C,S,V}	HIVD2	P4 ∉ {C,I,Y}
	P2 ∈ {I,V}		P3 ∉ {N,V}
	P1 ∉ {Q,K,P,T,V}		P2 ∈ {A,C,I,M,F,T,V}
	P1' ∉ {D,Q,K,S}		P1 ∈ {A,L,M,F,Y}
	P2' ∉ {R,N,D,G,K}		P1' ∉ {K}
	P3' ∉ {N}		P2' ∈ {A,E,I,L,S,V}
	P4' ∉ {A,N,Q,I,M,W,Y,V}		P3' ∉ {N,I,K,P}
HIVE1	P1 ∈ {L,M,F,Y}	HIVE2	P2 ∈ {A,C,I,M,F,V}
	P1' ∈ {L,M,F,P,Y}		P1 ∉ {R,Q,E,K}
	P4' ∉ {A,N,I,M,Y,V}		P2' ∈ {A,C,Q,E,I,L,S,T,V}
			P3' ∈ {A,C,M,F,Y}

Consensus rules for the HIV-1 PR data sets. The rules are listed in the priority order given by the OSRE method. The text in italics is the label for each rule.