Table 5.
Docking of acetylcholine and butyrylcholine
| Docking into: | ||||
| X-ray structures | Substrate-imprinted structures | |||
| Structure | ACh | BuCh | ACh | BuCh |
| Torpedo californica acetylcholine esterase | ||||
| Experimental data | + | - | + | - |
| 1CFJa | + | + | + | - |
| 1DX6a | + | + | + | + |
| 1E3Qa | - | - | + | - |
| 1EVEa | + | + | + | - |
| 1VXRa, b | - | - | - | - |
| 1QIM | + | + | + | - |
| No. false predictions | 2 | 4 | 1 | 1 |
| human butyrylcholine esterase | ||||
| Experimental data | + | + | + | + |
| 1P0M | - | - | - | - |
| 1XLUa | + | + | + | + |
| 1XLVa | + | + | + | + |
| 1XLWa | - | - | + | + |
| No. false predictions | 2 | 2 | 1 | 1 |
Docking of ACh and BuCh into six X-ray structures of the acetylcholine esterase from Torpedo californica and four X-ray structures of the human butyrylcholine esterase using FlexX. The substrates were docked into the not optimised X-ray structures and the substrate-imprinted structures. "+" and "-" indicate that the docking results predict ACh or BuCh to be a substrate or a non-substrate. Correct predictions are indicated by bold and large font type. Experimental data [45,46] is included for comparison. a Structure was resolved with an inhibitor bound. b Displaced histidine.