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. Author manuscript; available in PMC: 2009 Jun 22.
Published in final edited form as: Mol Biochem Parasitol. 2007 Nov 22;158(1):32–45. doi: 10.1016/j.molbiopara.2007.11.009

Table 5.

Unknown Plasmodium falciparum Protein EpiTAP PCR Product Details

Plasmodium spp. gene Size (bp)* Region Amplified Yield^ Comments
PFC0450w 327 Full length ++ 1st reaction annealing done at 54°C for 45 sec.
PFC0700c 924 Full length ++
PFC0210c 1194 Full length ++ 1st reaction annealing done at 60°C for 1.5 min.
2nd reaction ramp up done at 94°C for 3 min.
PF14_0074 1185 Full length ++
PF14_0751 564 Full length ++ 1st reaction annealing done at 54°C for 45 sec.
PFL0800c 624 Full length +++ 1st reaction annealing done at 54°C for 1.5 min.
PFI0165c 7212 Full length +++ 1st Reaction: 92°C for 2 min, then 35 cycles at 92°C for 10 sec, 40°C for 30sec, 60°C for 12min, followed by a final extension time at 60°C for 10 min.
PFA0515w 4413 Full length ++
PFD0425w 2952 Single exon ++ 1st Reaction: 92°C for 2 min, then 35 cycles at 92°C for 10 sec, 45°C for 30sec, 60°C for 12min, followed by a final extension time at 60°C for 10 min.
*

Size is for malaria antigen alone without promoter/terminator sequences

^

For final product; Scale: −, +/−, +, ++, +++

Unless otherwise specified the following conditions were used: First Reaction: 94°C for 3 min, then 32 cycles of three-temperature PCR at 94°C for 30 sec, 60°C for 1 min, 68°C for 3 min, followed by a final extension time at 68°C for 10 min. Second Reaction: 94°C for 1 min, then 32 cycles of 94°C for 30 sec, 60°C for 1.5 min, 68°C for 3 min, followed by a final extension at 68°C for 10 min.