Table 5.
Unknown Plasmodium falciparum Protein EpiTAP PCR Product Details
| Plasmodium spp. gene | Size (bp)* | Region Amplified | Yield^ | Comments |
|---|---|---|---|---|
| PFC0450w | 327 | Full length | ++ | 1st reaction annealing done at 54°C for 45 sec. |
| PFC0700c | 924 | Full length | ++ | |
| PFC0210c | 1194 | Full length | ++ | 1st reaction annealing done at 60°C for 1.5 min. 2nd reaction ramp up done at 94°C for 3 min. |
| PF14_0074 | 1185 | Full length | ++ | |
| PF14_0751 | 564 | Full length | ++ | 1st reaction annealing done at 54°C for 45 sec. |
| PFL0800c | 624 | Full length | +++ | 1st reaction annealing done at 54°C for 1.5 min. |
| PFI0165c | 7212 | Full length | +++ | 1st Reaction: 92°C for 2 min, then 35 cycles at 92°C for 10 sec, 40°C for 30sec, 60°C for 12min, followed by a final extension time at 60°C for 10 min. |
| PFA0515w | 4413 | Full length | ++ | |
| PFD0425w | 2952 | Single exon | ++ | 1st Reaction: 92°C for 2 min, then 35 cycles at 92°C for 10 sec, 45°C for 30sec, 60°C for 12min, followed by a final extension time at 60°C for 10 min. |
Size is for malaria antigen alone without promoter/terminator sequences
For final product; Scale: −, +/−, +, ++, +++
Unless otherwise specified the following conditions were used: First Reaction: 94°C for 3 min, then 32 cycles of three-temperature PCR at 94°C for 30 sec, 60°C for 1 min, 68°C for 3 min, followed by a final extension time at 68°C for 10 min. Second Reaction: 94°C for 1 min, then 32 cycles of 94°C for 30 sec, 60°C for 1.5 min, 68°C for 3 min, followed by a final extension at 68°C for 10 min.