Table 2.
Genes associated with early stages of microspore embryogenesis
| PCA name | Probe set | Expression level | E-value | Description | ||
|---|---|---|---|---|---|---|
| DH46 | DH6004 | DH6188 | ||||
| Cluster 3 | ||||||
| c3p1 | rbags22p06_s_at | 0.834 | 57.65 | 0.604 | 900E-76 | hAT dimerization domain-containing protein |
| c3p2 | Contig9177_at | 0.793 | 56.88 | 0.881 | 100E-100 | Shikimate kinase |
| c3p3 | Contig679_s_at | 0.707 | 51.97 | 0.997 | 4.00E-71 | Elongation factor 1-alpha (EF-1-alpha) |
| c3p4 | Contig16560_at | 0.724 | 31.48 | 1 | 2.00E-17 | D111/G-patch domain-containing protein |
| c3p5 | HU11B09u_s_at | 0.965 | 7.243 | 0.876 | 1.00E-126 | F-box domain containing protein |
| c3p6 | Contig18336_at | 0.921 | 6.356 | 0.764 | 4.00E-87 | Mitochondrial glycoprotein family protein |
| c3p7 | HVSMEa0004F18f2_s_at | 0.65 | 4.279 | 0.976 | 0.0 | Chloroplastic glutamine synthetase (GS2) |
| c3p8 | Contig7247_at | 0.952 | 3.404 | 0.837 | 4.00E-40 | Protein csAtPR5 |
| Cluster 5 | ||||||
| c5p1 | Contig4113_at | 0.845 | 7.032 | 0.366 | 1.00E-168 | Endonuclease |
| Cluster 6 | ||||||
| c6p1 | Contig3707_at | 1.295 | 0.01 | 0.999 | 5.00E-88 | TMS membrane family protein |
| c6p2 | Contig20828_at | 1.045 | 0.163 | 1.591 | 8.00E-59 | Cytochrome P450 |
| c6p3 | Contig8224_at | 1.101 | 0.199 | 1.128 | 1.00E-162 | Aldose reductase |
| c6p4 | Contig14939_at | 1.175 | 0.27 | 1.341 | 8.00E-81 | Sucrose transporter |
| c6p5 | Contig6294_at | 1.051 | 0.33 | 1.061 | 1.00E-167 | Brix domain containing protein |
| c6p6 | Contig21733_at | 1.126 | 0.396 | 1.207 | 7.00E-16 | Indole-3-acetate beta-glucosyltransferase |
| c6p7 | Contig3564_s_at | 1.23 | 0.399 | 1.65 | 1.00E-128 | Oxidoreductase. 2OG-Fe oxygenase family protein |
| c6p8 | Contig22536_at | 1.149 | 0.417 | 1.098 | 3.00E-48 | FAD-dependent oxidoreductase family protein |
| c6p9 | Contig7032_at | 1.037 | 0.424 | 1.778 | 0.0 | Beta-D-xylosidase |
| c6p10 | Contig7897_at | 1.11 | 0.439 | 1.139 | 2.00E-88 | Proton-dependent oligopeptide transport (POT) family protein |
| c6p11 | Contig1154_s_at | 1.227 | 0.475 | 1.402 | 1.00E-56 | Histone H2B |
| Cluster 7 | ||||||
| c7p2 | Contig17372_at | 1.251 | 0.252 | 1.007 | 5.00E-39 | Beta-1.3-glucanase |
| c7p3 | Contig2043_s_at | 1.393 | 0.258 | 1.09 | 4.00E-20 | Type 1 non-specific lipid transfer protein precursor |
| c7p5 | Contig25034_at | 1.358 | 0.33 | 1.048 | 2.00E-38 | EF hand family protein |