Table 1.
Term | Observed Frequency % | Expected Frequency % | P-value |
ENERGY | 14.30% | 1.50% | 1.99E-11 |
pentose-phosphate pathway | 4.80% | 0.10% | 3.13E-08 |
metabolism of energy reserves (e.g. glycogen, trehalose) | 3.20% | 0.10% | 0.00073 |
glycolysis and gluconeogenesis | 5.60% | 0.60% | 0.00027 |
METABOLISM | 21.40% | 6.50% | 9.80E-07 |
C-compound and carbohydrate metabolism | 13.50% | 2.80% | 2.62E-06 |
amino acid metabolism | 6.30% | 0.90% | 0.00059 |
assimilation of ammonia, metabolism of the glutamate group | 4.00% | 0.20% | 5.35E-05 |
nitrogen and sulfur metabolism | 4.80% | 0.30% | 4.35E-05 |
TRANSPORTED COMPOUNDS (SUBSTRATES) | 5.60% | 1.10% | 0.0161 |
This table indicates the functional terms that are over-represented in N-bicluster 9 vs. the whole genome using BioMaps with a 5% FDR cutoff to determine the statistical significance of p-values (see Methods for approach). The frequency of these terms in the functional annotation of the genes from N-bicluster and the p-value generated by BioMaps are indicated.