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. Author manuscript; available in PMC: 2009 Jun 28.
Published in final edited form as: J Biol Chem. 2006 May 16;281(31):21974–21987. doi: 10.1074/jbc.M603527200

TABLE 2. Selected proteins related to S. typhimurium LpxR.

Possible orthologues in the NCBI database as of March 24, 2006 were identified with the PSI-Blast algorithm using the predicted S. typhimurium LpxR protein sequence of 319 residues as the probe.

Organism Homology (gaps)a Approximate E values
S. typhi 318/318/319 8 × 10−178
S. paratyphi 308/308/310 2 × 10−171
E. coli O157:H7 228/272/318 (1) 1 × 10−133
Y. enterocolitica 230/269/320 (1) 2 × 10−124
Rhodospirillum rubrum 76/117/254 (20) 8 × 10−15
Gluconobacter oxydans 60/102/236 (9) 2 × 10−11
Xanthomonas campestris 59/94/254 (35) 3 × 10−7
V. cholerae V51 74/130/338 (61) 5 × 10−4
H. pylori J99 46/103/250 (15) 7 × 10−3
a

Homology is given as the number of identities/number of positives/number of residues (including gaps) in the related segment when compare with S. typhimurium LpxR, a hypothetical protein of 319 amino acid residues.