Most deletion chromosomes do not have secondary rearrangements. Verification of cytology and mapping of deletions was performed by FISH with YAC probes to chromosome 2. Hybridization signals on chromosome 2 are indicated with arrows; signals without arrows are on chromosomes other than 2 and are caused by YAC chimerism. (A) Deletion line 3 has two chromosomes 2, both with signals for each of YACs 144F11 (green, 9 cM), 158D10 (red, 15 cM), and 188A3 (yellow, 98 cM). (B) Deletion line 3 has signal for YAC 188A3 (green, 98 cM) on both chromosomes 2, but is missing signal for 456A8 (red, 14 cM) on one. (C) Deletion line 3 again has two signals for 188A3 (green, 98 cM), but only one chromosome 2 signal for YAC 304E7 (red, 13 cM). (D) In deletion line 10, one chromosome 2 has an inverted duplication containing 406F11 (red, 38 cM) and 88C11 (green, 48 cM).