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. 2009 May 1;75(13):4443–4451. doi: 10.1128/AEM.02591-08

TABLE 1.

Absolute concentrations of IPL- and CL-derived GDGTs for all hot spring and soil samples, IPL-estimated archaeal cell densities, and archaeal 16S rRNA and amoA gene copy numbers (for Leonard's spring only)

Site Sample Distance from spring (cm) Temp (°C) pHa Concn of GDGTs (ng/g dry sample)b
Estimated amt of archaeal cells/g No. of archaeal 16S copies/g sediment No. of amoA copies/g sediment
IPL
CL
0 1 2 3 4 Cren Cren′ Total 0 1 2 3 4 Cren Cren′ Total
Leonard's Hot spring 0 58 8.4 1.1 0.4 1.6 0.4 1.1 5.8 0.6 11 0.1 0.0 0.0 0.0 0.0 0.2 0.0 0.4 1.1E+07 7.3E+07 5.3E+05
Soil 10 36 8.6 9.7 18* 17* 1.9 2.1 8.2 0.6 22 4.4 0.9 0.8 0.7 1.2 5.8 0.2 14 5.7E+07 1.8E+09 7.1E+06
Soil 30 28 8.4 1.3 6.6 4.4 0.8 NA 15 3.4 32 0.1 0.1 0.1 0.0 NA 0.0 0.0 0.5 3.2E+07 3.6E+07 1.6E+07
Soil 60 20 8.6 0.8 4.0 2.3 0.4 NA 6.0 2.1 16 0.2 0.2 0.1 0.1 NA 2.9 0.3 3.9 1.6E+07 5.2E+07 1.8E+06
Soil 150 14 8.6 2.8 1.8 1.2 0.6 NA 7.0 2.4 16 1.4 0.1 0.1 0.1 NA 1.3 0.3 3.2 1.6E+07 6.5E+07 7.3E+06
“Ray's” Hot spring 0 89 8.2 42 48 75 130 210 22 7.5 540 5.4 4.6 6.8 11 13 2.1 0.4 44 5.4E+08 NA NA
Soil 10 42 7.0 4.8 0.9 1.8 1.9 7.6 20 2.9 40 2.0 0.8 2.7 2.2 5.8 16 0.9 31 4.0E+07 NA NA
Soil 20 33 6.1 2.2 2.5 3.9 6.5 NA 4.7 0.8 21 0.2 0.1 0.3 0.2 NA 3.5 0.3 4.5 2.1E+07 NA NA
Soil 40 25 6.9 0.4 0.2 0.4 0.3 NA 2.8 0.4 4.6 0.2 0.1 0.2 0.1 NA 0.8 0.1 1.4 4.6E+06 NA NA
Soil 80 20 7.0 1.6 1.1 0.7 0.3 NA 4.0 0.0 7.7 0.2 0.1 0.1 0.1 NA 1.3 0.2 1.9 7.7E+06 NA NA
Soil 250 12 7.7 0.2 0.0 0.1 0.1 NA 0.8 0.1 1.4 0.1 0.0 0.0 0.0 NA 0.2 0.0 0.5 1.4E+06 NA NA
a

pH was of streamers near source sediment sampled from “Ray's” hot spring.

b

Cren, crenarchaeol; Cren′, regioisomer of crenarchaeol; NA, not analyzed. *, GDGTs 1 and 2 in Leonard's 10-cm soil are leading regioisomers (Fig. 2e and g). Numbers correspond to GDGT structures shown in Fig. 1 (e.g., “0” is GDGT-0).