TABLE 4.
Properties of pBTK445 tagB ORFs and their deduced products
| Position (start-stop) | TagB ORF (no. of amino acid residues) | Locationa | G+C content (%) | Homolog
|
% Amino acid identity with nearest phylogenetic relative | Nearest phylogenetic relative (GenBank accession no.) | |
|---|---|---|---|---|---|---|---|
| IncP | Agrobacterium tumefaciens or Brucella suis | ||||||
| 10371-11135 | tagBA (254) | CP/PP | 42 | TraL | 43 | Xylella fastidiosa Ann-1 genome (ZP_00682673) | |
| 42 | Verminephrobacter eiseniae EF01-2, plasmid pVEIS01 (YP_980149) | ||||||
| 11149-11697 | tagB (182) | PP | 48 | TraR/TrbM | 38 | Conjugative broad-host-range plasmid pSB102 (NP_361032) | |
| 35 | Plasmid pKJK5 (YP_709155) | ||||||
| 12162-12929 | tagB1 (255) | PP | 52 | TrbN | VirB1 | 55 | Xanthomonas axonopodis pv. citri plasmid pXAC64 (NP_644764) |
| 44 | Xanthomonas campestris pv. vesicatoria plasmid pXCV38 (YP_361544) | ||||||
| 13265-13585 | tagB2 (106) | IM | 50 | TrbC | VirB2 | 32 | Aeromonas veronii plasmid pAc3249A (ABI83638) |
| 13604-14035 | tagB3 (143) | IM | 45 | TrbD | VirB3 | 34 | V. eiseniae EF01-2 plasmid pVEIS01 (YP_980124) |
| 13944-16358 | tagB4 (804) | OM | 48 | TrbE | VirB4 | 43 | Moraxella bovis plasmid pMBO-2 (BAD83765) |
| 42 | V. eiseniae EF01-2 plasmid pVEIS01 (YP_980123) | ||||||
| 16462-17103 | tagB5 (213) | PP | 45 | TrbJ | VirB5 | 33 | X. axonopodis pv. glycines plasmid pXAG81 (AAX12232) |
| 17502-18443 | tagB6 (313) | IM | 41 | TrbL | VirB6 | 45 | M. bovis plasmid pMBO-2 (BAD83763) |
| 34 | X. axonopodis pv. citri plasmid pXAC64 (NP_644769) | ||||||
| 18449-18820 | tagB7 (123) | IM | 46 | TrbK | VirB7 | ||
| 19072-19791 | tagB8 (239) | PP/IM | 50 | TrbF | VirB8 | 42 | X. fastidiosa Ann-1 ctg_247 (ZP_00682689) |
| 19810-20634 | tagB9 (274) | OM | 53 | TrbG | VirB9 | 42 | X. fastidiosa Ann-1 ctg_247 (ZP_00682690) |
| 20645-21850 | tagB10 (401) | OM | 55 | TrbI | VirB10 | 42 | Bartonella henselae (YP_034271) |
| 21860-22972 | tagB11 (370) | CP | 51 | TrbB | VirB11 | 43 | X. fastidiosa Ann-1 ctg_247 (ZP_00682692) |
a
IM, inner membrane; OM, outer membrane; CP, cytoplasmic; PP, periplasmic.