Table 7.
Minimum interaction energies and distances for homodimers of pyridine, pyrimidine and imidazole.
| Drude | ab initio | Difference | ||||
|---|---|---|---|---|---|---|
| Energy (kcal mol−1) | Distance (Å) | Energy (kcal mol−1) | Distance (Å) | Energy (kcal mol−1) | Distance (Å) | |
| Pyridine | ||||||
| 1 | −2.63 | 4.94 | −2.98 | 4.90 | 0.35 | 0.04 |
| 2 | −2.35 | 5.89 | −4.00 | 5.83 | 1.65 | 0.06 |
| 3 | −1.52 | 6.25 | −2.14 | 6.29 | 0.62 | −0.04 |
| Pyrimidine | ||||||
| 1 | −2.82 | 5.80 | −3.81 | 5.81 | 0.99 | −0.01 |
| 2 | −3.61 | 5.76 | −4.59 | 5.79 | 0.98 | −0.03 |
| 3 | −2.70 | 6.23 | −2.94 | 6.23 | 0.24 | 0.00 |
| 4 | −2.26 | 6.14 | −2.41 | 6.26 | 0.15 | −0.12 |
| 5 | −1.51 | 6.20 | −1.85 | 6.27 | 0.34 | −0.07 |
| Imidazole | ||||||
| 1 | −4.25 | 5.42 | −6.30 | 5.17 | 2.05 | 0.25 |
| 2 | −3.00 | 5.55 | −5.01 | 5.24 | 2.00 | 0.31 |
| 3 | −8.62 | 5.18 | −9.75 | 5.33 | 1.14 | −0.15 |
See Figure S3 of the supporting information for images of the model compound dimer orientations.