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. 2009 May 19;10:153. doi: 10.1186/1471-2105-10-153

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Copyright © 2009 Stivala et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Superposition of serpin B/C sheet query hits. (a) Superposition of the top 10 hits to the serpin B/C sheet query substructure, generated by simple orthogonal transformation to minimize RMSD between C_αatoms of the central residue in SSEs that are matched to each other between the query and the hit structure according to our method. (b) Multiple alignment of 5 of the top 10 hits generated by MUSTANG. Five are missing as they contain multiple chains which MUSTANG currently cannot process. Both images were generated with PyMOL.