TABLE I.
P values of the pseudo F-test and Over-dispersion factors (λ) for CGEMS data set.
| Unadjusteda |
PC-Finderb |
EIGENSTRATc |
||||
|---|---|---|---|---|---|---|
| Data set | p value | λ | p value | λ | p value | λ |
| NHSca vs NHSco | 0.104 | 1.005 | -- | -- | -- | -- |
| PLCOca vs PLCOco | 0.123 | 1.025 | -- | -- | -- | -- |
| NHSca vs PLCOco | <10-3 | 1.062 | 0.052 | 1.007 | 0.052 | 1.010 |
| PLCOca vs NHSco | <10-3 | 1.090 | 0.054 | 1.020 | 0.029 | 1.036 |
a
P-values for the pseudo F test and over-dispersion factors (λ) for the association test, both tests are not adjusted for PS.
b
P-values for the pseudo F test and over-dispersion factors (λ) for the association test, both tests are adjusted by PCs selected by the PC-Finder.
c
P-values for the pseudo F test and over-dispersion factors (λ) for the association test, both tests are adjusted by the top 10 ranked PCs