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. Author manuscript; available in PMC: 2009 Jul 7.
Published in final edited form as: Biochemistry. 2008 Dec 23;47(51):13610–13619. doi: 10.1021/bi801656u

TABLE 4. Kinetic and dissociation equilibrium constants for the interactions of the normal pentasaccharide with native, latent and cleaved antithrombin at 10°C, ionic strength 0.15 and pH 7.4.

Kinetic constants were determined by stopped-flow fluorimetry, monitoring the change in tryptophan or TNS fluorescence induced by pentasaccharide binding, as described in Experimental Procedures. kon and koff were determined form the slopes and ordinate intercepts of linear plots of observed pseudo-first order rate constants, kobs, versus pentasaccharide concentration (Fig. 3A). kon and koff values ± SE were calculated by linear regression. K1, k+2 and k-2 were determined by fitting the data from the plots of Fig. 3B to the rectangular hyperbolic equation (37). These values ± SE were calculated by nonlinear regression. KD values are the means ± SE of three fluorescence titrations conducted at 10°C as described in Experimental Procedures

Antithrombin form kon (106 M-1s-1) koff (s-1) k-2 (s-1) K1 (μM) k+2 (s-1) Kd (nM)
Native 33 ± 1 0.1 ± 0.2 0.3 ± 0.9 6 ± 0.4 200 ± 5 4 ± 2
Latent 30 ± 4 1.5 ± 0.9 3 ± 1 9 ± 1 200 ± 15 150 ± 50
Cleaved 14 ± 6a 2 ± 2 b 9 ± 2 14 ± 4 200 ± 30 160 ± 90
a

Calculated from K1 and k+2

b

Calculated from K1, k+2 and KD