TABLE 4. Kinetic and dissociation equilibrium constants for the interactions of the normal pentasaccharide with native, latent and cleaved antithrombin at 10°C, ionic strength 0.15 and pH 7.4.
Kinetic constants were determined by stopped-flow fluorimetry, monitoring the change in tryptophan or TNS fluorescence induced by pentasaccharide binding, as described in Experimental Procedures. kon and koff were determined form the slopes and ordinate intercepts of linear plots of observed pseudo-first order rate constants, kobs, versus pentasaccharide concentration (Fig. 3A). kon and koff values ± SE were calculated by linear regression. K1, k+2 and k-2 were determined by fitting the data from the plots of Fig. 3B to the rectangular hyperbolic equation (37). These values ± SE were calculated by nonlinear regression. KD values are the means ± SE of three fluorescence titrations conducted at 10°C as described in Experimental Procedures
Antithrombin form | kon (106 M-1s-1) | koff (s-1) | k-2 (s-1) | K1 (μM) | k+2 (s-1) | Kd (nM) |
---|---|---|---|---|---|---|
Native | 33 ± 1 | 0.1 ± 0.2 | 0.3 ± 0.9 | 6 ± 0.4 | 200 ± 5 | 4 ± 2 |
Latent | 30 ± 4 | 1.5 ± 0.9 | 3 ± 1 | 9 ± 1 | 200 ± 15 | 150 ± 50 |
Cleaved | 14 ± 6a | 2 ± 2 b | 9 ± 2 | 14 ± 4 | 200 ± 30 | 160 ± 90 |
Calculated from K1 and k+2
Calculated from K1, k+2 and KD