Table 3.
Candidate reference genes
Gene Symbol | Gene Name | TaqMan Assay Number* | Genebank accession |
Hprt | Hypoxanthine phosphoribosyltransferase | Rn01527840_m1 | NM_012583 |
Gapdh | Glyceraldehyde-3-phosphate dehydrogenase | Rn99999916_s1 | NM_017008 |
Oaz1 | Ornithine decarboxylase antizyme 1 | Rn00821793_g1 | NM_139081 |
β2m | Beta-2 microglobulin | Rn00560865_m1 | NM_012512 |
Ppia | Peptidyl-prolyl cis-trans isomerasa | Rn00690933_m1 | NM_017101 |
Rpl13a | Ribosomal Protein L13A | Rn00821946_g1 | NM_173340 |
18S | Eukaryotic 18S rRNA | Hs99999901_s1 | X03205.1 |
Ywhaz | Tyrosine 3-monooxygenase | Rn00755072_m1 | NM_013011.3 |
Sdha | Succinate dehydrogenase complex, subunit A | Rn00590475_m1 | NM_130428.1 |
Gusb | Glucuronidase, beta | Rn00566655_m1 | NM_017015.2 |
*"_m" indicates an assay whose probe spans an exon junction and will not detect genomic DNA. "_s" indicates an assay whose probes and primers are designed within a single exon and, hence, will detect genomic DNA. "_g" indicates an assay that may detect genomic DNA as the assay probe and primers may also be within a single exon.