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. Author manuscript; available in PMC: 2009 Jul 9.
Published in final edited form as: Neurobiol Dis. 2007 Nov 28;29(3):515–528. doi: 10.1016/j.nbd.2007.11.008

Table 3.

Probes whose expressions are altered by at least a log2 ratio of ±0.5 in nine-month-old transgenic α-syn mice. P value for each probe is ≤0.05 and q-value is ≤20%.

Probe Set ID Genbank ID Gene Name log2 (TG/WT) q-value
1436964_at BB314814 DNA SEGMENT, CHR 7, ERATO DOI 715, EXPRESSED -2.78 18.07
1442568_at BM213120 RIKEN CDNA 3110039L19 GENE -1.98 18.07
1443281_at BB297094 RIKEN CDNA C030017F07 GENE -1.61 8.66
1442742_at BE994454 RIKEN CDNA 1700121J11 GENE -1.55 17.17
1440773_at BB209878 F-BOX ONLY PROTEIN 8 -1.37 8.51
1440163_at BB392503 RIKEN CDNA 6030490B17 GENE -1.33 8.51
1430660_at AV291471 RIKEN CDNA 2610100B20 GENE -1.31 11.70
1431248_at BB637274 RIKEN CDNA 5031426D15 GENE -1.26 8.66
1426413_at BM116592 NEUROGENIC DIFFERENTIATION 1 -1.22 17.17
1455512_at AI852151 GENE MODEL 879, (NCBI) -1.20 8.66
1455956_x_at AV310588 CYCLIN D2 -1.17 10.02
1429769_at BI107300 PROTEIN GERANYLGERANYLTRANSFERASE TYPE I, BETA SUBUNIT -1.12 8.66
1451301_at BB633110 TROPOMODULIN 2 -1.06 8.51
1426721_s_at BB707122 TCDD-INDUCIBLE POLY(ADP-RIBOSE) POLYMERASE -1.02 0.00
1440304_at BB085100 EXPRESSED SEQUENCE BB214985 -0.99 8.51
1455393_at BB009037 CERULOPLASMIN -0.95 17.17
1422795_at AV273804 CULLIN 3 -0.95 12.54
1434216_a_at BG070689 NUDIX (NUCLEOSIDE DIPHOSPHATE LINKED MOIETY X)-TYPE MOTIF 19 -0.95 18.07
1432944_at AK013658 RIKEN CDNA 2900046L07 GENE -0.94 0.00
1450061_at BM120053 ECTODERMAL-NEURAL CORTEX 1 -0.93 8.66
1440534_at BB177862 RIKEN CDNA 6330403A02 GENE -0.93 15.94
1457198_at AV291009 NEUROPILIN 1 -0.92 17.17
1447314_at AI480643 TRANSFORMING GROWTH FACTOR, BETA RECEPTOR III -0.91 10.02
1429703_at AV154947 RIKEN CDNA 2900072G11 GENE -0.90 0.00
1442214_at BG173293 NUCLEAR FACTOR I/B -0.90 8.51
1433184_at AK020162 RIKEN CDNA 6720477C19 GENE -0.89 15.02
1424525_at BC024515 GASTRIN RELEASING PEPTIDE -0.89 13.49
1454286_at AV007471 RIKEN CDNA 1110004M10 GENE -0.88 12.54
1458263_at BE979587 CUG TRIPLET REPEAT, RNA BINDING PROTEIN 2 -0.87 0.00
1453402_at AV338754 RIKEN CDNA 6430500C12 GENE -0.86 10.02
1459144_at BB518323 HYPOTHETICAL PROTEIN LOC213817 -0.85 13.49
1430808_at AK005461 TBC1 DOMAIN FAMILY, MEMBER 5 -0.85 10.02
1420965_a_at BM120053 ECTODERMAL-NEURAL CORTEX 1 -0.84 10.66
1445391_at AW554652 DIAPHANOUS HOMOLOG 1 (DROSOPHILA) -0.83 19.25
1455914_at AW554430 EXPRESSED SEQUENCE AI987944 -0.82 19.25
1435129_at AW495875 PROTEIN TYROSINE PHOSPHATASE 4A2 -0.81 10.02
1444557_at BG060557 SMT3 SUPPRESSOR OF MIF TWO 3 HOMOLOG 1 (YEAST) -0.81 8.66
1439940_at AV328280 RIKEN CDNA 2900019G14 GENE -0.80 19.25
1443526_at BM204661 PHD FINGER PROTEIN 21A -0.80 0.00
1439123_at BB367687 PHD FINGER PROTEIN 21A -0.79 15.02
1445708_x_at AV158652 RIKEN CDNA 3110021A11 GENE -0.79 19.25
1453068_at BM226301 PR DOMAIN CONTAINING 2, WITH ZNF DOMAIN -0.78 19.25
1446953_at BG073799 TRANSCRIPTION FACTOR 4 -0.77 8.66
1445037_at AV339661 RIKEN CDNA 6430510B20 GENE -0.77 10.02
1437793_at BB711615 TANKYRASE, TRF1-INTERACTING ANKYRIN-RELATED ADP-RIBOSE POLYMERASE 2 -0.76 8.51
1446374_at BB460605 RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 10 -0.76 12.54
1442500_at C77406 EXPRESSED SEQUENCE C77406 -0.76 10.02
1460186_at AV061337 RIKEN CDNA 1810073M23 GENE -0.76 19.25
1441538_at BB267954 RIKEN CDNA B930011P16 GENE -0.75 17.17
1442409_at BB166984 DNA SEGMENT, CHR 9, WAYNE STATE UNIVERSITY 90, EXPRESSED -0.74 19.25
1429051_s_at BE825056 SRY-BOX CONTAINING GENE 11 -0.74 13.49
1444472_at BB154631 SNF1-LIKE KINASE 2 -0.74 13.49
1440728_at BB283560 POTASSIUM LARGE CONDUCTANCE CALCIUM-ACTIVATED CHANNEL, SUBFAMILY M, ALPHA MEMBER 1 -0.74 18.07
1437180_at BE824567 RIKEN CDNA 6530403A03 GENE -0.73 0.00
1439169_at BB471557 EUKARYOTIC TRANSLATION INITIATION FACTOR 4E NUCLEAR IMPORT FACTOR 1 -0.73 13.49
1449068_at X98096 ZINC FINGER PROTEIN 148 -0.72 8.66
1434835_at BM230523 CDNA SEQUENCE BC037674 -0.72 17.17
1432352_at AK014201 RIKEN CDNA 5730405I09 GENE -0.71 17.17
1446159_at BB044011 P21 (CDKN1A)-ACTIVATED KINASE 7 -0.71 8.51
1454510_at AK013612 RIKEN CDNA 2900034C19 GENE -0.71 8.51
1444785_at AI503808 SLOAN-KETTERING VIRAL ONCOGENE HOMOLOG -0.71 12.54
1442659_at BB244656 PROTOCADHERIN 9 -0.70 13.49
1423433_at BG069917 TROVE DOMAIN FAMILY, MEMBER 2 -0.69 8.51
1448282_at BC006750 PLEIOTROPIC REGULATOR 1, PRL1 HOMOLOG (ARABIDOPSIS) -0.69 11.70
1460123_at AW541072 G PROTEIN-COUPLED RECEPTOR 1 -0.69 17.17
1453864_at AK014097 RIKEN CDNA 3110030G19 GENE -0.69 19.25
1445847_at BE948333 NEUROTROPHIC TYROSINE KINASE, RECEPTOR, TYPE 2 -0.69 18.07
1459219_at BM120546 RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 2 -0.68 10.02
1458469_at BB205662 CASITAS B-LINEAGE LYMPHOMA B -0.68 12.54
1459238_at AV319481 PHOSPHOLAMBAN -0.68 8.51
1441072_at BB353142 CUG TRIPLET REPEAT, RNA BINDING PROTEIN 2 -0.67 10.02
1416892_s_at BC021353 RIKEN CDNA 3110001A13 GENE -0.67 8.51
1459734_at BB737833 PROTEASOME (PROSOME, MACROPAIN) 26S SUBUNIT, NON-ATPASE, 14 -0.67 17.17
1430675_at BM932606 RIKEN CDNA 2900055J20 GENE -0.67 18.07
1434378_a_at BG868949 MAX DIMERIZATION PROTEIN 4 -0.67 8.51
1436248_at AW120749 RAS PROTEIN ACTIVATOR LIKE 2 -0.67 8.51
1441487_at BB197646 TRIPARTITE MOTIF PROTEIN 2 -0.66 18.07
1442679_at BM241898 MITOGEN ACTIVATED PROTEIN KINASE KINASE 4 -0.66 17.17
1451506_at BB280300 MYOCYTE ENHANCER FACTOR 2C -0.66 15.02
1428936_at BI080417 ATPASE, CA++ TRANSPORTING, PLASMA MEMBRANE 1 -0.66 10.02
1438282_at AV344830 SYNAPTOTAGMIN I -0.66 10.66
1434178_at AV297525 MYELOID/LYMPHOID OR MIXED-LINEAGE LEUKEMIA 3 -0.66 13.58
1454424_at AK011729 RIKEN CDNA 2610040L17 GENE -0.66 8.66
1455799_at BB751387 RAR-RELATED ORPHAN RECEPTOR BETA -0.66 8.51
1443508_at BB131767 EXPRESSED SEQUENCE BB075781 -0.65 17.17
1420579_s_at NM_021050 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR HOMOLOG -0.65 12.54
1458376_at BE648536 RIKEN CDNA B930025B16 GENE -0.65 18.07
1458690_at BB079254 MEMBRANE-ASSOCIATED RING FINGER (C3HC4) 7 -0.65 15.02
1439209_at BB540782 TRANSCRIPTION FACTOR 12 -0.65 12.54
1416129_at NM_133753 ERBB RECEPTOR FEEDBACK INHIBITOR 1 -0.65 8.66
1443260_at BB055155 MYELOID ECOTROPIC VIRAL INTEGRATION SITE 1 -0.64 11.70
1437064_at AV232123 ANDROGEN RECEPTOR -0.64 17.17
1418955_at NM_009567 ZINC FINGER PROTEIN 93 -0.64 8.51
1454743_at BQ177153 NUCLEOPORIN 205 -0.64 10.66
1435505_at BB698273 DYSTROPHIA MYOTONICA-CONTAINING WD REPEAT MOTIF -0.64 15.02
1445340_at BB156822 PAM, HIGHWIRE, RPM 1 -0.64 0.00
1431482_at AV153257 RIKEN CDNA 2900012M01 GENE -0.63 18.07
1426546_at BQ179435 TESTIS-SPECIFIC KINASE 2 -0.62 15.94
1444409_at BQ176035 RABPHILIN 3A-LIKE (WITHOUT C2 DOMAINS) -0.62 10.66
1420136_a_at AI427540 OPIOID GROWTH FACTOR RECEPTOR-LIKE 1 -0.62 19.25
1441231_at BB233964 GENE MODEL 1167, (NCBI) -0.62 15.94
1456896_at BB053380 RIKEN CDNA 6720462K09 GENE -0.62 18.07
1454922_at BM246326 EXPRESSED SEQUENCE AI553587 -0.62 13.49
1456413_at BB235927 PHOSPHODIESTERASE 4D INTERACTING PROTEIN -0.61 8.66
1441654_at BB345762 GUANINE NUCLEOTIDE BINDING PROTEIN, ALPHA 10 -0.61 19.25
1428616_at BG075140 ZINC FINGER PROTEIN 131 -0.61 17.17
1459947_at BB007036 THIOREDOXIN DOMAIN CONTAINING 5 -0.61 15.02
1444516_at AI503166 PROTEIN TYROSINE PHOSPHATASE, RECEPTOR-TYPE, F INTERACTING PROTEIN, BINDING PROTEIN 2 -0.61 13.58
1438245_at BI664122 NUCLEAR FACTOR I/B -0.61 8.66
1435663_at AI646838 ESTROGEN RECEPTOR 1 (ALPHA) -0.60 18.07
1430195_at BF662697 RIKEN CDNA 2810043O03 GENE -0.60 15.94
1437426_at BM240080 RIKEN CDNA 1110067P07 GENE -0.60 8.66
1437984_x_at BB461609 HLA-B-ASSOCIATED TRANSCRIPT 1A -0.59 17.17
1437339_s_at BB241731 PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 5 -0.59 18.07
1439106_at AV320128 ZINC FINGER PROTEIN 462 -0.59 10.66
1457019_s_at BB241474 RIKEN CDNA 3110030G19 GENE -0.59 13.49
1417644_at BC021484 SARCOSPAN -0.59 18.07
1437784_at AW550878 CBFA2T1 IDENTIFIED GENE HOMOLOG (HUMAN) -0.59 17.17
1435474_at AV117817 TAF5 RNA POLYMERASE II, TATA BOX BINDING PROTEIN (TBP)-ASSOCIATED FACTOR -0.59 18.07
1445774_at BB479183 POTASSIUM LARGE CONDUCTANCE CALCIUM-ACTIVATED CHANNEL, SUBFAMILY M, ALPHA MEMBER 1 -0.59 8.51
1440020_at BB212045 EXPRESSED SEQUENCE AI195322 -0.59 10.66
1438352_at BM217851 MICROTUBULE-ASSOCIATED PROTEIN, RP/EB FAMILY, MEMBER 2 -0.58 18.07
1430058_at AK016826 STEM-LOOP BINDING PROTEIN -0.58 15.94
1430291_at AK004325 RIKEN CDNA 1110060D06 GENE -0.58 19.25
1452092_at AK019474 RIKEN CDNA 4631426J05 GENE -0.58 12.54
1446670_at BM241206 CUG TRIPLET REPEAT, RNA BINDING PROTEIN 2 -0.57 13.58
1444186_at BB519728 RIKEN CDNA 2900006B13 GENE -0.57 15.02
1421948_a_at BB042564 RIKEN CDNA 2610507L03 GENE -0.57 18.07
1441100_at BB496952 MBT DOMAIN CONTAINING 1 -0.57 15.94
1446272_at BB200545 RIKEN CDNA 6430598J10 GENE -0.57 11.70
1443161_at BM240648 TRICHORHINOPHALANGEAL SYNDROME I (HUMAN) -0.57 8.66
1446750_at BB524087 IMPRINTED AND ANCIENT -0.57 11.70
1439174_at AI644595 UNC-5 HOMOLOG C (C. ELEGANS) -0.57 10.02
1431228_s_at AA120741 RIKEN CDNA 4930526I15 GENE -0.56 15.02
1417818_at BC014727 WW DOMAIN CONTAINING TRANSCRIPTION REGULATOR 1 -0.56 18.07
1444456_at BB460570 RIKEN CDNA 9030425P06 GENE -0.56 13.49
1435433_at BE688580 EXPRESSED SEQUENCE R75364 -0.56 18.07
1457716_at BM235074 ZINC FINGER, A20 DOMAIN CONTAINING 1 -0.55 18.07
1453416_at BE199211 GROWTH ARREST-SPECIFIC 2 LIKE 3 -0.55 15.02
1443337_at BB531021 RIKEN CDNA B130020M22 GENE -0.55 19.25
1442587_at BB451946 RIKEN CDNA C030017F07 GENE -0.55 19.25
1441545_at BM243297 RIKEN CDNA 9230115F04 GENE -0.55 12.54
1437676_at AV279478 SPERM ASSOCIATED ANTIGEN 9 -0.54 8.51
1431402_at BB626088 KIN OF IRRE LIKE 3 (DROSOPHILA) -0.54 19.25
1447204_at BB337014 MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE KINASE 5 -0.54 10.02
1418168_at BB223737 ZINC FINGER, CCHC DOMAIN CONTAINING 14 -0.53 8.51
1440770_at AI505544 B-CELL LEUKEMIA/LYMPHOMA 2 -0.53 19.25
1457781_at BG063584 KCNQ1 OVERLAPPING TRANSCRIPT 1 -0.53 10.02
1434829_at BB487560 CASITAS B-LINEAGE LYMPHOMA -0.53 8.51
1442924_at BB430910 CALSYNTENIN 2 -0.53 15.02
1422486_a_at AK004804 MAD HOMOLOG 4 (DROSOPHILA) -0.53 17.17
1454182_at AK019946 RIKEN CDNA 5430417C01 GENE -0.53 11.70
1438535_at BB523030 NEURONAL DIFFERENTIATION RELATED PROTEIN -0.52 19.25
1429652_at AK009976 RIKEN CDNA 1190002C06 GENE -0.52 8.51
1439626_at BB209799 TROPOMODULIN 3 -0.52 15.02
1439192_at BB524078 NEURO-ONCOLOGICAL VENTRAL ANTIGEN 2 -0.52 19.25
1415925_a_at NM_053074 NUCLEOPORIN 62 -0.52 13.58
1454852_at BB795189 TRANS-ACTING TRANSCRIPTION FACTOR 1 -0.52 15.94
1433543_at BI690018 ANILLIN, ACTIN BINDING PROTEIN (SCRAPS HOMOLOG, DROSOPHILA) -0.52 13.49
1442320_at BB364132 HYPOTHETICAL LOC553096 -0.52 19.25
1453371_at AK012860 RIKEN CDNA 4930535B03 GENE -0.51 18.07
1455225_at AV237615 SYNAPTIC NUCLEAR ENVELOPE 1 -0.51 18.07
1433641_at AV014063 MAD HOMOLOG 5 (DROSOPHILA) -0.51 17.17
1440311_at BB259710 SORBIN AND SH3 DOMAIN CONTAINING 1 -0.51 19.25
1436795_at BM247060 RIKEN CDNA 9630058J23 GENE -0.51 10.66
1433803_at BQ032637 JANUS KINASE 1 -0.51 18.07
1458053_at BB051811 ABL-INTERACTOR 2 -0.51 18.07
1429918_at AK018317 RIKEN CDNA 6530403F17 GENE -0.51 11.70
1443020_at BB027719 RIKEN CDNA F830020C16 GENE -0.51 8.66
1455854_a_at BB053082 SLINGSHOT HOMOLOG 1 (DROSOPHILA) -0.50 19.25
1446965_at BG067578 RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 12 -0.50 18.07
1441635_at BM202709 NUCLEAR RECEPTOR SUBFAMILY 6, GROUP A, MEMBER 1 -0.50 18.07
1418000_a_at NM_008410 INTEGRAL MEMBRANE PROTEIN 2B -0.50 8.51
1428368_at BM213829 RHO GTPASE ACTIVATING PROTEIN 21 0.51 15.94
1418506_a_at NM_011563 PEROXIREDOXIN 2 0.55 17.17
1416028_a_at NM_008258 HEMATOLOGICAL AND NEUROLOGICAL EXPRESSED SEQUENCE 1 0.58 15.02
1426448_at BM199789 PRAJA1, RING-H2 MOTIF CONTAINING 0.58 15.02
1420828_s_at NM_011739 TYROSINE 3-MONOOXYGENASE/TRYPTOPHAN 5-MONOOXYGENASE ACTIVATION PROTEIN, THETA POLYPEPTIDE 0.65 15.94
1435258_at AW551717 DNA SEGMENT, CHR 2, ERATO DOI 217, EXPRESSED 0.66 15.02
1421873_s_at NM_009000 RAB24, MEMBER RAS ONCOGENE FAMILY 0.67 15.02
1450243_a_at NM_030598 DOWN SYNDROME CRITICAL REGION GENE 1-LIKE 1 0.72 15.02
1433799_at AV366849 RETINOL DEHYDROGENASE 13 (ALL-TRANS AND 9-CIS) 0.79 10.66
1415773_at BF118393 NUCLEOLIN 0.85 10.66
1455868_a_at BB387906 TUBULIN, GAMMA COMPLEX ASSOCIATED PROTEIN 2 0.86 15.02
1428370_at AK018264 RIKEN CDNA 1500011B03 GENE 1.02 7.49
1448732_at M14222 CATHEPSIN B 1.25 15.02
AFFX-GapdhMur/M32599_5_at AFFX-GapdhMur/M3259 9_5 SIMILAR TO GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (GAPDH) 1.57 15.02
HHS Vulnerability Disclosure