Table 1.
Number of ARFs and Aux/IAA with different domains and motifs.
Proteins | P.p. | S.m. | A.t. | P.t. * | O.s. | S.b. | V.v. | G.m. |
ARF with DBD domain | ||||||||
Total number | 12 | 7 | 23 | 38 (39) | 25 | 25 | 20 | 59 |
No III &IV domain | 1 | 1 | 4 | 12 (6) | 6 | 6 | 5 | 12 |
Q-rich | 0 | 3 | 4** | 8 (10) | 8 | 8 | 3 | 18 |
ARF without DBD domain | ||||||||
Only III&IV domain | 1 | 4 | 0 | 11 (0) | 0 | 0 | 0 | 8 |
Q-rich, no DBD domain | 2 | 2 | 0 | 0 (0) | 0 | 0 | 0 | 0 |
Aux/IAA | ||||||||
Total number | 3 | 3 | 29 | 33 (35) | 33 | 26 | 27 | 62 |
LxLxL | 0 | 2 | 28 | 23 (31) | 27 | 21 | 17 | 55 |
LxLxPP | 3 | 1 | 3 | 0 (6) | 3 | 3 | 2 | 4 |
No domain II | 0 | 0 | 5 | 1 (2) | 6 | 2 | 8 | 21 |
No KR domain | 0 | 0 | 10 | 9 (10) | 11 | 7 | 9 | 22 |
(P.p. – P. patens, S.m. – S. moellendorffii, A.t. – A. thaliana, P.t. – P. trichocarpa, O.s. – O. sativa, S.b. – S. bicolor, V.v. – Vitis vinifera G.m – G. max).
* The number of ARFs and Aux/IAAs from Kalluri et al. [27] is shown in brackets.
** In addition, one A. thaliana ARF, ARF5, has a methionine-rich middle region.