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. 2009 May 29;75(14):4770–4781. doi: 10.1128/AEM.00370-09

FIG. 3.

FIG. 3.

ML phylogenetic tree of F. oxysporum f. sp. cubense (Foc) and other isolates in the F. oxysporum complex inferred from combined TEF and MtSSU rRNA sequence data. A tree with a similar topology was generated using BI and MP (tree scores, confidence interval = 0.73 and retention index = 0.95). The three main clades are indicated at their respective branches with A, B, C, and D to the right of the tree. For each F. oxysporum f. sp. cubense taxon, VCG and race designation, geographic origin, and mating type are indicated. Taxa representing other F. oxysporum isolates are indicated as a human pathogen or nonpathogenic or with the specific forma specialis. Bayesian posterior probabilities (>0.7) and bootstrap values (>70%) for the ML analyses and MP are indicated in that order at the internodes. The tree is rooted with Fusarium sp. strains NRRL 22903 and NRRL 25184.