TABLE 1.
16S rRNA gene probes used for FISH (helper probes and/or competitors according to the references)
| Probe or mixture | Probe composition | Target | Reference(s) |
|---|---|---|---|
| EUBmix | EUB338 + EUB338-II + EUB338-III | Bacteria domain | 2,16 |
| GAOmix | GB_G2 + GAOQ431 + GAOQ989 | “Candidatus Competibacter phosphatis” | 26,11 |
| TFOmix | TFO_DF218 + TFO_DF618 | Defluviicoccus vanus-related organisms, cluster 1 | 48 |
| DFmix | DF988 + DF1020 | Defluviicoccus vanus-related organisms, cluster 2 | 35 |
| PAOmix | PAO462 + PAO651 + PAO846 | “Candidatus Accumulibacter phosphatis” | 12 |
| ALF969 | ALF969 | Alphaproteobacteria | 39 |
| BET42a | BET42a | Betaproteobacteria | 33 |
| GAM42a | GAM42a | Gammaproteobacteria | 33 |
| AMAR839 | AMAR839 | Amaricoccus organisms (except A. tamworthensis) | 34 |