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. 2009 May 15;75(14):4790–4800. doi: 10.1128/AEM.02643-08

TABLE 1.

Primers and fluorogenic probes used for quantitative PCR

Gene Primer or probe Sequence (5′-3′)e Amplicon size (bp)
Tomato LAT52 gene up_Lat1a AGACCACGAGAACGATATTTGC 92
lo_Lat2a TTCTTGCCTTTTCATATCCAGACA
Lpa FAM-CTCTTTGCAGTCCTCCCTTGGGCT-BHQ1
P. oligandrum ITS up_F1b TGCTTCGTCGCAAGACT 124
lo_146d CGTATTCGGAGTATAGTTCAGT
142_LNAc FAM-AGTCTGCGTCTATTTTGGA-BHQ1
P. dissotocum ITS up_504d GTTTGGATCGCTTTGCT 215
lo_702d CCGAAGCTAGAGCGCTT
183_LNAc FAM-TGACTGGAGTTGTTTTCTGTT-BHQ1
a

From Yang and coworkers (65).

b

From Godfrey and coworkers (15).

c

From Tambong and coworkers (58).

d

From Le Floch and coworkers (25).

e

Letters in bold indicate locked nucleic acids. FAM, 6-carboxyfluorescein.