TABLE 3.
NDV strains tested by the NDV-pathotyping RRT-PCR and their results in the specificity assay
| NDV straina | Host | GenBank accession no. | Genotype | Virulenceb | RRT-PCR specific forc:
|
|||
|---|---|---|---|---|---|---|---|---|
| Lentogens
|
Velogens/mesogens
|
|||||||
| Test result | CT ± SD | Test result | CT ± SD | |||||
| HK-99/75 | Duck | EU604269 | I | L | + | 34.0 ± 1.1 | − | NA |
| HK-138/80 | Duck | EU604270 | I | L | + | 18.9 ± 0.8 | − | NA |
| Ulster 2/C | Chicken | AY562991 | I | L | + | 23.6 ± 0.2 | − | NA |
| PHY-LMV42 | Chicken | DQ097394 | I | L | + | 20.7 ± 0.5 | − | NA |
| Queensland V4 | Chicken | AF217084 | I | L | + | 16.8 ± 0.3 | − | NA |
| CA-12/63 | Turkey | EU604268 | II | L | + | 14.7 ± 0.2 | − | NA |
| BG-13/69 | Chicken | EU604248 | II | V | − | NA | + | 25.8 ± 1.0 |
| UK-Eaw/62 | Chicken | EU604260 | II | V | − | NA | + | 18.4 ± 0.4 |
| B1 | Chicken | AF309418 | II | L | + | 16.4 ± 0.2 | − | NA |
| LaSota | Chicken | AJ629062 | II | L | + | 15.5 ± 0.4 | − | NA |
| HU/ck/146-V/95 | Chicken | EU604271 | II | L | + | 20.8 ± 0.7 | − | NA |
| Beaudette C | Chicken | X04719 | II | M | − | NA | + | 16.1 ± 0.3 |
| KR-1/49 | Chicken | EU604814 | III | V | − | NA | + | 16.9 ± 0.4 |
| Mukteswar | Chicken | EF201805 | III | M | − | NA | + | 13.8 ± 0.3 |
| H/Ph | Chicken | FJ687488 | III | M | − | NA | + | 14.5 ± 0.2 |
| Herts'33/L | Chicken | FJ687487 | H33 W | V | − | NA | + | 21.5 ± 0.4 |
| BG-60/81 | Chicken | EU604266 | IV | V | − | NA | + | 20.7 ± 0.5 |
| IT-7/60 | Chicken | EU604256 | IV | V | − | NA | + | 15.7 ± 0.5 |
| MA-307/77 | Chicken | EU604259 | IV | V | − | NA | + | 21.3 ± 0.3 |
| BG-25/78 | Chicken | EU604249 | V | V | − | NA | + | 17.0 ± 0.3 |
| HU-7/72 | Chicken | EU604252 | V | V | − | NA | + | 13.3 ± 0.1 |
| KR-2/84 | Chicken | EU604258 | V | V | − | NA | + | 12.9 ± 0.5 |
| PE-8/85 | Chicken | EU604263 | V | V | − | NA | + | 15.5 ± 0.3 |
| BG-29/86 | Chicken | EU604267 | VI | V | − | NA | + | 15.2 ± 0.7 |
| GR-12/68 | Chicken | EU604251 | VI | V | − | NA | + | 13.2 ± 0.3 |
| IQ-218/78 | Pigeon | EU604254 | VI | M | − | NA | + | 13.6 ± 0.2 |
| Israel 70 | Chicken | EU604255 | VI | V | − | NA | + | 13.5 ± 0.3 |
| KR-5/99 | Chicken | EU665683 | VI | V | − | NA | + | 17.1 ± 0.1 |
| CA-48/91 | Pigeon | FJ687489 | VI | M | − | NA | + | 12.6 ± 0.3 |
| HU-238/84 | Pigeon | FJ687486 | VI | M | − | NA | + | 15.3 ± 0.2 |
| IT-227/82 | Pigeon | AJ880277 | VI | M | − | NA | + | 15.9 ± 0.4 |
| BE-14/93 | Chicken | EU604247 | VII | V | − | NA | + | 15.2 ± 0.2 |
| BG-31/96 | Chicken | EU604250 | VII | V | − | NA | + | 15.8 ± 0.1 |
| DE-82/94 | Chicken | EU604265 | VII | V | − | NA | + | 25.4 ± 0.2 |
| ID-1/88 | Cockatoo | EU604253 | VII | V | − | NA | + | 13.9 ± 0.2 |
| TR-2/96 | Chicken | EU604264 | VII | V | − | NA | + | 23.4 ± 0.3 |
| IT-147/94 | Turkey | EU604262 | VIII | V | − | NA | + | 28.8 ± 0.1 |
| JP-382/84 | Chicken | EU604257 | VIII | V | − | NA | + | 29.0 ± 0.1 |
| ZA-16/90 | Chicken | EU604261 | VIII | V | − | NA | + | 30.8 ± 0.3 |
For APMV-1 isolates, the year/country of isolation are indicated in the designation of the virus (e.g., ZA-16/90: country of origin, South Africa; year of isolation, 1990; see also ISO 3166 two-letter country code standard for details [http://www.iso.org]).
L, lentogenic; M, mesogenic; V, velogenic.
NA, not applicable; +, postive; −, negative.