TABLE 1.
Genotyping results of major antigenic structures on the cell surface
| Reference strain | Genotypesa | No. of isolates tested |
|---|---|---|
| NZAK04051 | B:15:P1.7,16-26; F3-3; ST-32 (cc32) | 2 |
| NZAK04078 | B:4:P1.7-2,13-1; F4-1; ST-5709 (cc35) | 1 |
| NZD2-052-1 | B:4:P1.7-2,4; F1-18; ST-41 (cc41/44) | 1 |
| NZ98/254 | B:4:P1.7-2,4; F1-5; ST-42 (cc41/44) | 2 |
| NZ96/142 | B:4:P1.7-2,4; F1-5; ST-154 (cc41/44) | 1 |
| NZ02/16 | B:4:P1.7-2,4; F5-5; ST-154 (cc41/44) | 1 |
| NZ05/65 | B:4:P1.7-2,30; F1-5; ST-42 (cc41/44) | 1 |
| NZAK04038 | B:14:P1.22-12,14; F1-5; ST-437 (cc41/44) | 1 |
| NZA2-008-1 | B:nt:P1.5,2; F5-1; ST-32 (cc32) | 1 |
| NZ00/68 | C:2b:P1.5,2; F5-8; ST-8 (cc8) | 1 |
| NZ97/296 | C:2b:P1.5,2; F3-9; ST-66 (cc8) | 1 |
| NZ96/211 | C:2b:P1.7-2,4; F3-9; ST-66 (cc8) | 1 |
| NZ94/106 | C:2a:P1.5,2; F1-1; ST-11 (cc11) ★ | 2 |
| NZ99/142 | C:2a:P1.5,2; F1-30; ST-11 (cc11) | 1 |
| NZ01/303 | C:2a:P1.5,2; F3-6; ST-11 (cc11) | 1 |
| NZ93/149 | C:2a:P1.5,2; F4-1; ST-11 (cc11) | 2 |
| NZ03/288 | C:2a:P1.5,2; F5-1; ST-11 (cc11) | 1 |
| NZ05/118 | C:2a:P1.5,2; F3-6; ST-4251 (cc11) ★ | 1 |
| NZ04/155 | C:2a:P1.5-1,10-1; F3-6; ST-11 (cc11) ★ | 3 |
| NZ00/198 | C:2a:P1.5-1,10-4; F3-6; ST-11 (cc11) ★ | 12 |
| NZ03/101 | C:2a:P1.5-1,10-8; F3-6; ST-11 (cc11) ★ | 6 |
| NZAK04020 | C:2a:P1.7-2,4; F3-6; ST-11 (cc11) ★ | 1 |
| NZ03/236 | C:2a:P1.7-2,4; F5-2; ST-11 (cc11) ★ | 5 |
| NZ96/59 | C:2a:P1.7-2,4; F5-2; ST-2344 (cc-) | 1 |
| NZ03/232 | W:2a:P1.5,2; F1-1; ST-11 (cc11) | 19 |
| NZ95/204 | W:2b:P1.5,2; F1-1; ST-11 (cc11) | 1 |
| NZ05/50b | W:2a:P1.7-2,4; F-; ST-11 (cc11) ★ | 1 |
| NZ03/243 | W:2a:P1.7-2,4; F5-2; ST-11 (cc11) ★ | 14 |
| NZAK04008 | W:1:P1.18-1,3; F3-9; ST-22 (cc22) | 1 |
| NZAK04031c | W:1:P1.18-1,3; F-; ST-184 (cc22) | 1 |
| NZ01/257 | W:nt:P1.18-1,3; F4-1; ST-22 (cc22) | 9 |
| NZ00/276c | W:nt:P1.-,-; F4-1; ST-22 (cc22) | 1 |
| NZD4-208-1 | W:nt:P1.18-1,3; F5-5; ST-22 (cc22) | 1 |
| NZAK04043 | W:nt:P1.18-1,3; F1-5; ST-184 (cc22) | 1 |
| NZD1-032-1 | W:4:P1.18-1,16; F4-1; ST-184 (cc22) | 1 |
| NZ03/38 | W:14:P1.19,15; F5-8; ST-4183 (cc23) | 1 |
| NZAK04005 | W:15:P1.18,25; F5-5; ST-198 (cc198) | 1 |
| NZ97/169 | W:4:P1.19-1,26-4; F1-7; ST-1846 (cc41/44) | 1 |
| NZAK04113 | Y:14:P1.5-2,10-1; F1-6; ST-23 (cc23) | 1 |
| NZA1-348-1c | Y:a48:P1.5-1,10-1; F4-1; ST-167 (cc167) | 1 |
| NZA1-354-1 | Y:4:P1.5-1,10-4; F5-5; ST-167 (cc167) | 1 |
| NZ95/195d | Y:a48:P1.5-1,10-4; F1-5; ST-5159 (cc167) | 1 |
a
nt, nontypeable; ★, belongs to the ET-15 subgroup of ST-11; cc, clonal complex. Boldface indicates deletion.
b
A 20-amino-acid deletion in the VR resulted in no assignment of an allele name. Most likely a deletion of F5-2.
c
No PCR product obtainable; may denote a deletion.
d
Not able to be named in the usual format, instead matches porB allele 48 from http://neisseria.org/nm/typing/porb.