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. 2008 Oct 21;69(1-2):179–194. doi: 10.1007/s11103-008-9415-4

Table 1.

cDNA libraries generated from corn

Library ID Size fraction Tissue Number of clones Number of clusters Number of high quality selected clones
176, 196, 213, 225, CL11 Short Mixed male/female infl., roota 57,317 13,623 1,601
177, 191, 197, 214, 226 Medium Mixed male/female infl., roota 111,196 22,519 4,102
199, 222, 227, CL12 Long Mixed male/female infl., roota 89,052 18,269 1,263
259, 260, 264, CN2 None Mixed male/female infl., roota 8,656 5,616 93
298, 301, C298, CN, CN10, CN101, CN22, CN23, CN24, CL13, CN31, CN32 None Embryo (20 DAP)a 77,855 16,507 1,067
501 0.0–0.5 Treated tissues 6,400 4,396 34
502 0.5–1.0 Treated tissues 19,318 6,700 294
503, 507 1.0–2.0 Treated tissues 24,850 10,050 629
504, 504N, 505, 506 >2 Treated tissues 49,074 14,225 672
600, 601, 602, 604 None Female flower 3,423 1,894 19
605 >1 kb Female flower 700 549 5
606 0.5–1.0 Female flower 9,382 3,626 61
607 <0.5 Female flower 588 535 2
CB5, CB6 >2 Immature M/F flower, kernel, embryo 22,728 3,265 31
CC1 <1 kb Callus tissue 1,135 790 32
CC2 >1 kb Callus tissue 275 190 4
CR1 None Corn roots (different treatments) 1,915 1,544 42
Other 35 35
GenBankb 133 133 133
Total 484,032 10,084

Source of the libraries, number of clones and number of clusters in each sample are listed. Treated tissues were collected from seedlings that were subjected to a variety of stress treatments including heat, cold, drought, salt and N-deficiency

aLibraries were derived from Pioneer Hi-Bred International, Inc Hybrid 35A19. All other libraries were derived from various other hybrids

bThese sequences were made full-length by assembling GenBank ESTs per clone