Table 3.
Comparison between Direct Sequencing and Multiplex-PCR Fragment Analysis in Patients with CEBPA Mutations and Polymorphisms
| Sample ID | Age | Sex | WHO (FAB) classification | Cytogenetic results | Direct sequencing of PCR product* | Multiplex PCR Fragment analysis |
|---|---|---|---|---|---|---|
| nt 733-734 ins GGGG, | TAD1:+4 bp, | |||||
| D25 | 24 | M | AML, NOC (M5) | 46,XY [20] | nt 1516-1517 ins | bZIP:+18 bp |
| CCAAGCAGCGCAACGTGG | ||||||
| D31 | 50 | F | AML, NOC (M1) | 46,XX [20] | nt 1159 ins T | TAD2:+1 bp |
| E5 | 67 | M | AML, NOC (M2) | 46,XY [20] | nt1440 sub CG>GT | Wild type |
| G6 | 69 | F | AML, NOC (M2) | 46,XX [20] | nt 1490 sub G<T | |
| G9 | 58 | F | AML, NOC (M2) | 46,XX [20] | nt 708 del C and nt 1528-1529 ins AGA | bZIP:+3 bp |
| TAD1:−1 bp, | ||||||
| A026 | 47 | F | AML, NOC (M5) | 46,XX,t (4;13;15) (q21;q14;q26) [cp17]/46,XX [3] | nt 939 sub C>T | Wild type |
| A027 | 43 | M | AML, NOC (M1) | 46,XY,del(920) 9 9q11.20) [2] /46,XY [18] | nt 787 sub GCCT>CTAC | Wild type |
| C005 | 46 | M | AML, NOC (M5) | 46,XY [20] | nt 1505 ins AGG | bZIP:+3 bp |
| A010 | 49 | F | APL† (M3) | 46,XX,t (15;17) (q22;q210) [20] | nt 1175-1180 dup‡ | TAD2:+6 bp |
| G2 | 70 | M | AML with multilineage dysplasia | Complex including abnormalities chromosome 5 and 7 | nt 1175-1180 dup‡ | TAD2:+6 bp |
Sequencing numbering according to GenBank accession U34070.
APL, acute promyelocytic leukemia.
Polymorphism.