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. 2009 May 6;96(9):3483–3494. doi: 10.1016/j.bpj.2008.12.3921

Table 2.

List of proteins stabilized by PFF02 in simulations starting from completely extended conformations

PDB ID #AA Topology RMSD(Å) Structure Overlay
Helical 1L2Y 20 α 3.11 graphic file with name fx1.gif
1RIJ 23 α 4.36 graphic file with name fx2.gif
1WQE 23 αα 2.33 graphic file with name fx3.gif
1F4I 40 ααα 3.29 graphic file with name fx4.gif
1ENH 54 ααα 3.40 graphic file with name fx5.gif
1EDK 56 ααα 4.05 graphic file with name fx6.gif
Sheet 1LE0 12 ββ 1.50 graphic file with name fx7.gif
1LE1 12 ββ 1.96 graphic file with name fx8.gif
2EVQ 12 ββ 2.62 graphic file with name fx9.gif
1J4M 14 ββ 2.46 graphic file with name fx10.gif
1K43 14 ββ 2.67 graphic file with name fx11.gif
1NIZ 14 ββ 2.04 graphic file with name fx12.gif
1PG1 16 ββ 1.67 graphic file with name fx13.gif
1U6U 17 ββ 4.57 graphic file with name fx14.gif
1E0Q 17 ββ 3.47 graphic file with name fx15.gif
1A2P 17 ββ 2.53 graphic file with name fx16.gif
GSGS 20 βββ 2.19 graphic file with name fx17.gif
Mixed 1T8J 23 ββα 4.69 graphic file with name fx18.gif
1RIK 29 ββα 4.15 graphic file with name fx19.gif
1BHI 29 αββ 4.11 graphic file with name fx20.gif

Overlays of lowest energy conformation (red on the web and light color in print) show the structural agreement with the native conformation (blue on the web and dark color in print).